Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0959
         (380 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56863| Best HMM Match : F5_F8_type_C (HMM E-Value=0)                28   2.2  
SB_34250| Best HMM Match : DUF1168 (HMM E-Value=1.3)                   28   2.2  
SB_11967| Best HMM Match : Pollen_allerg_2 (HMM E-Value=1.7)           27   5.2  
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)                    27   6.8  
SB_54195| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.0  
SB_52975| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.0  
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.0  
SB_20049| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-05)                 26   9.0  
SB_14080| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.0  

>SB_56863| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
          Length = 4248

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 187  FGPSTEAESSGDQAGFIRHSACDPRRRSRPFPHEHPSQGQRPQWT 321
            F  S + E S D++   R  A  PRRRS    ++    G  PQW+
Sbjct: 3593 FSLSVQNEDSTDES---RSRARKPRRRSVKLDYDGDHSGMDPQWS 3634


>SB_34250| Best HMM Match : DUF1168 (HMM E-Value=1.3)
          Length = 642

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 187 FGPSTEAESSGDQAGFIRHSACDPRRRSRPFPHEHPSQGQRPQWT 321
           F  S + E S D++   R  A  PRRRS    ++    G  PQW+
Sbjct: 387 FSLSVQNEDSTDES---RSRARKPRRRSVKLDYDGDHSGMDPQWS 428


>SB_11967| Best HMM Match : Pollen_allerg_2 (HMM E-Value=1.7)
          Length = 1815

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 9/35 (25%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
 Frame = -1

Query: 188 KAGRYHRRHQRPPL*SSSVMWWK---SSLHHFVQQ 93
           +  RYH+   + P+ +++ +WW+   + + HF+Q+
Sbjct: 266 RQARYHKWRPKVPVKNNAKLWWQFASTCILHFIQE 300


>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
          Length = 2726

 Score = 26.6 bits (56), Expect = 6.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 81  NLPPLLYKMVQRTFPPHHRGT 143
           NLPPL+Y  ++ T P  H GT
Sbjct: 159 NLPPLIYNNIE-TLPQLHHGT 178


>SB_54195| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 370

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 199 TEAESSGDQAGFIRHSACDPRRRSRPFPHEHPSQGQRPQ 315
           TE      + G +R +   PR+  RP  H H  QG  P+
Sbjct: 330 TERSKDEVRKGLLRVAKGRPRKHGRPEVHGHLLQGAPPK 368


>SB_52975| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1077

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 199 TEAESSGDQAGFIRHSACDPRRRSRPFPHEHPSQGQRPQ 315
           TE      + G +R +   PR+  RP  H H  QG  P+
Sbjct: 19  TERSKDEVRKGLLRVAKGRPRKHVRPEVHGHQLQGAPPK 57


>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 797

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +2

Query: 233 LYDIAPVTPGVAADLSHMNTPAKVSGHNGPEELSA 337
           L+  AP T G+  D ++ N P+KVSG N P ++++
Sbjct: 448 LFQDAPHT-GIKFD-NYENIPSKVSGENQPPKITS 480


>SB_20049| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-05)
          Length = 1023

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 254 SQALCRIKPAWSPEDSASVEGPKAGRYHRRHQRP 153
           SQ+L    P  +P+D+  V  P+A    RR  RP
Sbjct: 501 SQSLSETTPTHTPQDAQLVTTPQAHVNRRRSLRP 534


>SB_14080| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1190

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 14  EIVQIYTYIHVKQTTKMFSRALKPAALAVQN 106
           +I   Y Y+  KQ  K F+R  KP A    N
Sbjct: 12  QIYSSYPYLRNKQQAKYFNRGAKPLAPLTPN 42


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,645,591
Number of Sequences: 59808
Number of extensions: 315764
Number of successful extensions: 758
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 644574580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)