Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0959
(380 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR536548-1|CAG38785.1| 338|Homo sapiens MDH2 protein. 98 1e-20
BC001917-1|AAH01917.1| 338|Homo sapiens malate dehydrogenase 2,... 97 2e-20
AF047470-1|AAC03787.1| 338|Homo sapiens malate dehydrogenase pr... 97 2e-20
DQ402957-1|ABD77290.1| 305|Homo sapiens mitochondrial malate de... 87 2e-17
AC005077-1|AAS07425.1| 316|Homo sapiens unknown protein. 85 1e-16
BC008735-1|AAH08735.2| 627|Homo sapiens FBXL10 protein protein. 33 0.41
AK027692-1|BAB55301.1| 653|Homo sapiens protein ( Homo sapiens ... 33 0.41
AK027440-1|BAB55112.1| 704|Homo sapiens protein ( Homo sapiens ... 33 0.41
AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein. 33 0.41
AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC... 33 0.41
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 31 1.6
S74659-1|AAC60643.2| 102|Homo sapiens aggrecan keratan sulfate ... 29 3.8
AB209706-1|BAD92943.1| 252|Homo sapiens hypothetical protein FL... 28 8.7
>CR536548-1|CAG38785.1| 338|Homo sapiens MDH2 protein.
Length = 338
Score = 97.9 bits (233), Expect = 1e-20
Identities = 53/102 (51%), Positives = 69/102 (67%)
Frame = +2
Query: 62 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 241
M S ++P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALVRPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 242 IAPVTPGVAADLSHMNTPAKVSGHNGPEELSAAIKDADVVVI 367
IA TPGVAADLSH+ T A V G+ GPE+L +K DVVVI
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVI 98
>BC001917-1|AAH01917.1| 338|Homo sapiens malate dehydrogenase 2,
NAD (mitochondrial) protein.
Length = 338
Score = 97.1 bits (231), Expect = 2e-20
Identities = 53/102 (51%), Positives = 68/102 (66%)
Frame = +2
Query: 62 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 241
M S +P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALARPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 242 IAPVTPGVAADLSHMNTPAKVSGHNGPEELSAAIKDADVVVI 367
IA TPGVAADLSH+ T A V G+ GPE+L +K DVVVI
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVI 98
>AF047470-1|AAC03787.1| 338|Homo sapiens malate dehydrogenase
precursor protein.
Length = 338
Score = 97.1 bits (231), Expect = 2e-20
Identities = 53/102 (51%), Positives = 68/102 (66%)
Frame = +2
Query: 62 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 241
M S +P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALARPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 242 IAPVTPGVAADLSHMNTPAKVSGHNGPEELSAAIKDADVVVI 367
IA TPGVAADLSH+ T A V G+ GPE+L +K DVVVI
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVI 98
>DQ402957-1|ABD77290.1| 305|Homo sapiens mitochondrial malate
dehydrogenase 2, NAD protein.
Length = 305
Score = 86.6 bits (205), Expect = 2e-17
Identities = 46/78 (58%), Positives = 53/78 (67%)
Frame = +2
Query: 134 QRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGH 313
Q N K IGQPL+LLLK +PLV+RL LYDIA TPGVAADLSH+ T A V G+
Sbjct: 1 QNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETKAAVKGY 59
Query: 314 NGPEELSAAIKDADVVVI 367
GPE+L +K DVVVI
Sbjct: 60 LGPEQLPDCLKGCDVVVI 77
>AC005077-1|AAS07425.1| 316|Homo sapiens unknown protein.
Length = 316
Score = 84.6 bits (200), Expect = 1e-16
Identities = 43/64 (67%), Positives = 50/64 (78%)
Frame = +2
Query: 176 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHNGPEELSAAIKDAD 355
IGQPL+LLLK +PLV+RL LYDIA TPGVAADLSH+ T A V G+ GPE+L +K D
Sbjct: 14 IGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCD 72
Query: 356 VVVI 367
VVVI
Sbjct: 73 VVVI 76
>BC008735-1|AAH08735.2| 627|Homo sapiens FBXL10 protein protein.
Length = 627
Score = 32.7 bits (71), Expect = 0.41
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 158 RPPL*SSSVMWWKSSLHHFVQQ 93
RPPL SS WW+SSL +F QQ
Sbjct: 125 RPPLGSSLSPWWRSSLTYFQQQ 146
>AK027692-1|BAB55301.1| 653|Homo sapiens protein ( Homo sapiens
cDNA FLJ14786 fis, clone NT2RP4000737, moderately
similar to Mus musculus F-box protein FBL10 mRNA. ).
Length = 653
Score = 32.7 bits (71), Expect = 0.41
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 158 RPPL*SSSVMWWKSSLHHFVQQ 93
RPPL SS WW+SSL +F QQ
Sbjct: 151 RPPLGSSLSPWWRSSLTYFQQQ 172
>AK027440-1|BAB55112.1| 704|Homo sapiens protein ( Homo sapiens
cDNA FLJ14534 fis, clone NT2RM2000599, weakly similar to
Homo sapiens F-box protein Lilina (LILINA) mRNA. ).
Length = 704
Score = 32.7 bits (71), Expect = 0.41
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 158 RPPL*SSSVMWWKSSLHHFVQQ 93
RPPL SS WW+SSL +F QQ
Sbjct: 202 RPPLGSSLSPWWRSSLTYFQQQ 223
>AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein.
Length = 1336
Score = 32.7 bits (71), Expect = 0.41
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 158 RPPL*SSSVMWWKSSLHHFVQQ 93
RPPL SS WW+SSL +F QQ
Sbjct: 834 RPPLGSSLSPWWRSSLTYFQQQ 855
>AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC
domain 2 protein.
Length = 827
Score = 32.7 bits (71), Expect = 0.41
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 158 RPPL*SSSVMWWKSSLHHFVQQ 93
RPPL SS WW+SSL +F QQ
Sbjct: 358 RPPLGSSLSPWWRSSLTYFQQQ 379
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 181 PAFGPSTEAESSGDQAGFIRHSACDPRRRSRPFPHEHPSQGQRP 312
P G TE + G A + ++ +P PFP E PS + P
Sbjct: 761 PPTGAETEESTEGPSATEVPSASEEPSPSEVPFPSEEPSPSEEP 804
>S74659-1|AAC60643.2| 102|Homo sapiens aggrecan keratan sulfate
domain protein.
Length = 102
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 190 GPSTEAESSGDQAGFIRHSACDPRRRSRPFPHEHPSQGQRP 312
G +TE + G A + ++ +P PFP E PS + P
Sbjct: 1 GAATEESTEGPSATEVPSASEEPSPSEVPFPSEEPSPSEEP 41
>AB209706-1|BAD92943.1| 252|Homo sapiens hypothetical protein
FLJ20531 variant protein.
Length = 252
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = -1
Query: 311 GR*PWLGCSCGKGRLRRRGSQALCRIKPAWSPEDSASVEGPKAGRYHRRHQRPP 150
G P L C R GSQA PAW ED+A + GPK R + + P
Sbjct: 11 GMWPSLEALCSLFAARSTGSQAQSAPTPAWD-EDTAQI-GPKRIRKAAKRELMP 62
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,710,967
Number of Sequences: 237096
Number of extensions: 1670620
Number of successful extensions: 4270
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4257
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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