Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0959
         (380 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   0.92 
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   3.7  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   4.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   4.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   6.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   8.5  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 0.92
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 290 CSCGKGRLRRRGSQALCRIKPA 225
           C+C  GR+RRR   A  R KP+
Sbjct: 406 CACCPGRVRRRYQPAF-RCKPS 426


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = +1

Query: 202 EAESSGDQAGFIRHSACDPRRRSRPFPHE 288
           E    G   G+     CD R++  P P +
Sbjct: 154 ELSQPGSLNGYGSSDGCDARKKKGPTPRQ 182


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = +1

Query: 190 GPSTEAE-SSGDQAGFIRHSACDPRRRSRPFPHEHPSQGQR 309
           GP++    ++G  +  +  S     +   P+P  HP  G +
Sbjct: 67  GPNSPGSFTAGCHSNLLSTSPSGQNKAVAPYPPNHPLSGSK 107


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = +1

Query: 190 GPSTEAE-SSGDQAGFIRHSACDPRRRSRPFPHEHPSQGQR 309
           GP++    ++G  +  +  S     +   P+P  HP  G +
Sbjct: 67  GPNSPGSFTAGCHSNLLSTSPSGQNKAVAPYPPNHPLSGSK 107


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 323 QVHCGR*PWLGCSCGKG 273
           + H G  P++  +CGKG
Sbjct: 196 RTHTGEKPYVCKACGKG 212


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 105 MVQRTFPPHHRGTLKWWSLVPPVVS 179
           MV+     H+ G L++W     VVS
Sbjct: 267 MVEGNESDHNDGRLRYWRTPSVVVS 291


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,251
Number of Sequences: 438
Number of extensions: 3048
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9300375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)