Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0953
         (811 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0662 + 16732965-16733037,16733310-16733413,16734468-167348...    29   3.3  
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52...    29   3.3  
12_02_0509 - 19829360-19830400,19831475-19831821,19831920-19832073     29   4.4  
01_01_0569 - 4214513-4214669,4215082-4216031,4216488-4216547           29   5.8  
10_08_0772 + 20471748-20473004                                         28   7.6  
07_03_1559 + 27727492-27728193                                         28   7.6  

>05_03_0662 +
           16732965-16733037,16733310-16733413,16734468-16734861,
           16736291-16736901,16739238-16739289,16739771-16739826,
           16739962-16740190,16740980-16741212,16741480-16741740
          Length = 670

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +2

Query: 587 HSAAPPDSSG*TRAPPAIP 643
           HSAAPP  S  T APP++P
Sbjct: 317 HSAAPPPDSPSTAAPPSLP 335


>02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-523368,
            525209-525401,525978-526330,526693-526791,526864-526935,
            527062-527213,527338-527386,527755-527885,528067-528307,
            528392-528565,528656-528797,529236-529282,529370-529450,
            530170-530271,530345-530440,531437-531444,531575-531616,
            531830-531894,534761-534853,534888-534959,535303-535509,
            536318-537226,537503-538158
          Length = 1429

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 20/79 (25%), Positives = 36/79 (45%)
 Frame = +3

Query: 423  RAPHHCTTHPKVTNIIINKLNWYKMCLMATLAATTPLRCRLHYCKLNSTVNVGGYTAPRP 602
            + P +C      TN++ NK+N + + L   L  +T    R+  C ++ +V     T+ +P
Sbjct: 1158 QCPDNCFDITSKTNVLYNKINTFVVKLDKKLKMSTGSPERILLCNVDKSVGQCS-TSQKP 1216

Query: 603  RTVRGRHEHPPRSLTPGYA 659
            +    R   P R  T  Y+
Sbjct: 1217 KHDLRRILQPARYYTDPYS 1235


>12_02_0509 - 19829360-19830400,19831475-19831821,19831920-19832073
          Length = 513

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 606 SGGAALCSLPRLQLSLIYNSAIGSGGEWW 520
           S G    SL  L  SL  +S+ GSG EWW
Sbjct: 368 SAGGMAVSLLVLGFSLRVSSSSGSGSEWW 396


>01_01_0569 - 4214513-4214669,4215082-4216031,4216488-4216547
          Length = 388

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = -2

Query: 648 G*GIAGGARVYPELSGGAALCSLPRLQLSLIYNSAIGSGGE 526
           G G AG  RV     GGAAL ++PRL + L      G GGE
Sbjct: 46  GGGEAG--RVRGGGGGGAALFAVPRLFVGLAAKRGAGDGGE 84


>10_08_0772 + 20471748-20473004
          Length = 418

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -3

Query: 305 STLLFICYIVILSCHISTRGCTPHTYVIMHSIERVQR 195
           +TLL +C I + +C +STR      + +   +E+  R
Sbjct: 6   TTLLVLCLIYVTTCSLSTRTAAFRAHDLRRGLEQAMR 42


>07_03_1559 + 27727492-27728193
          Length = 233

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -2

Query: 636 AGGARVYPELSGGAALCSLPRLQLSLIYNSAIGSG-GEWWPPGL 508
           AGG     +  G AALCS P L+    Y   +G+  G  W P L
Sbjct: 156 AGGGGEGEDAHGAAALCSTPELRKH--YEQLVGAARGRPWSPRL 197


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,231,821
Number of Sequences: 37544
Number of extensions: 476487
Number of successful extensions: 1428
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1427
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)