Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0951
(501 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0347 - 24267184-24267400,24268316-24268665 32 0.30
02_04_0160 - 20427774-20428217,20428301-20428402,20428503-204285... 32 0.30
11_01_0674 - 5502275-5502954,5503054-5504746 31 0.52
07_01_0245 - 1803170-1803887,1803971-1804641 31 0.69
11_01_0673 - 5491694-5493102,5493386-5493995 30 0.91
10_03_0010 + 7007694-7007888,7007994-7008059,7008161-7008334,700... 29 1.6
08_02_0347 + 16065800-16065974,16066178-16066306,16067407-160674... 29 2.1
01_06_0208 - 27540077-27540992,27541310-27541497 29 2.1
04_03_0229 - 13006869-13007017,13007925-13008089,13008178-130083... 29 2.8
06_02_0011 - 10569471-10572245 28 3.7
11_01_0410 - 3111899-3112513,3112907-3112962,3113884-3114355 28 4.8
10_08_0851 - 21065832-21065948,21066361-21066705,21067181-210674... 28 4.8
01_04_0130 + 16462428-16463210,16463644-16463796,16464707-164647... 28 4.8
12_01_0257 + 1898950-1899636 27 6.4
11_01_0675 - 5508815-5511277 27 6.4
05_04_0375 + 20750170-20751011,20751707-20751865,20752894-207531... 27 8.5
04_01_0070 - 706640-706747,707221-707307,707397-707502,707585-70... 27 8.5
03_01_0363 + 2827990-2828055,2828215-2829306,2829715-2829837,282... 27 8.5
>05_05_0347 - 24267184-24267400,24268316-24268665
Length = 188
Score = 31.9 bits (69), Expect = 0.30
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -3
Query: 97 EGRTKHQDSGSVEGWTPHPAPAGD 26
EGR H D VEGW+P PAGD
Sbjct: 164 EGRGDHDDV-RVEGWSPREVPAGD 186
>02_04_0160 -
20427774-20428217,20428301-20428402,20428503-20428595,
20428675-20428860,20428966-20429213,20429292-20429412,
20430674-20430718,20431086-20431138,20431152-20431173
Length = 437
Score = 31.9 bits (69), Expect = 0.30
Identities = 25/94 (26%), Positives = 37/94 (39%)
Frame = -1
Query: 342 IVPFL*DPTCRTSSSWQAANSPGATTILSNTVCSFVTRLKTAA*SVGDGHSSVCLFRRA* 163
I FL C +S G+ LSNT CS V + SV +S R+
Sbjct: 6 IAVFLSSVICAVASDMGGDPGGGSELHLSNTTCSKVKMVSQVRPSVNQMETSDDATRQVI 65
Query: 162 VSTESSGAGLHLGKAGSANKRSKGGRSIKTRGLL 61
+T + G +G G+ + + GR + G L
Sbjct: 66 PNTRNEG---RMGPTGNTGLKRRKGRGLTINGTL 96
>11_01_0674 - 5502275-5502954,5503054-5504746
Length = 790
Score = 31.1 bits (67), Expect = 0.52
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -3
Query: 430 NLIGESLDSLFRWQSFHDDYDISNVLPG 347
NL+ ESL ++ WQSF D D+ VLPG
Sbjct: 155 NLVIESLSDVYLWQSFDDATDL--VLPG 180
>07_01_0245 - 1803170-1803887,1803971-1804641
Length = 462
Score = 30.7 bits (66), Expect = 0.69
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3
Query: 21 AVSPAGAGWGVHPSTDP 71
A PAGAG GVHPST P
Sbjct: 21 APRPAGAGAGVHPSTSP 37
>11_01_0673 - 5491694-5493102,5493386-5493995
Length = 672
Score = 30.3 bits (65), Expect = 0.91
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -3
Query: 430 NLIGESLDSLFRWQSFHDDYDISNVLPG 347
NL+ ESL ++ WQSF DY VLPG
Sbjct: 166 NLVIESLPDVYLWQSF--DYPTELVLPG 191
>10_03_0010 +
7007694-7007888,7007994-7008059,7008161-7008334,
7009232-7009306,7009384-7009510,7012280-7012371,
7012496-7012566,7012683-7012792,7013016-7013053,
7013825-7013960,7014382-7014456,7014574-7014697,
7014917-7015013,7015426-7015451,7016180-7016255,
7016499-7016636,7016735-7016872
Length = 585
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 89 PPFDLLLAEPAFPRCKPAPDDSVLTQALLKRHTELC-PSPTDQAAVL 226
PP +L + +FP PA D +L L +RH C P P V+
Sbjct: 17 PPPPFILRQLSFPAAVPALDLDILCCRLSRRHRLACLPQPPSDVLVV 63
>08_02_0347 +
16065800-16065974,16066178-16066306,16067407-16067432,
16067474-16067557
Length = 137
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -3
Query: 94 GRTKHQDSGSVEGWTPHP--APAGDTASTTTD 5
G+ +HQ +GS G PH A GDT T D
Sbjct: 36 GKREHQQNGSGRGARPHQGRADGGDTVGVTLD 67
>01_06_0208 - 27540077-27540992,27541310-27541497
Length = 367
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = +1
Query: 166 GPSKEAHGAMSVTYRSSSCFEPRHETADSIGQYCCGSRRICSLP--TRRSAASWVLQEGD 339
GPS EA GA R + R A Q CG + P RR SW ++G
Sbjct: 65 GPSAEAAGAWGSVVRLARARRRRAGAACPARQQRCGGFATAARPGNPRRGDVSWDARDGA 124
Query: 340 NDGREER 360
R R
Sbjct: 125 RAARRRR 131
>04_03_0229 -
13006869-13007017,13007925-13008089,13008178-13008332,
13010276-13011021
Length = 404
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 25 YPRPGRDGASTLQQTPSLDASSAL 96
+PR G DG L QTPS A+ AL
Sbjct: 83 FPRRGEDGVHLLSQTPSSPAAWAL 106
>06_02_0011 - 10569471-10572245
Length = 924
Score = 28.3 bits (60), Expect = 3.7
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 116 PAFPRCKPAPDDSVLTQALLKRHTEL--CPSPTDQAAVLSLVTKLQTVLDNIVVAPGEFA 289
PAFP K P SVL L R+ C S + A++++++ L T L +
Sbjct: 227 PAFPPYKHQPATSVLRSNYLDRYKLFVSCNSTSFVASLVTVILLLSTELSKHGIRSKAVI 286
Query: 290 ACQLEEVR-QVGSYKKG 337
C + ++ VG+Y G
Sbjct: 287 VCVVADLLCLVGAYAAG 303
>11_01_0410 - 3111899-3112513,3112907-3112962,3113884-3114355
Length = 380
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = +1
Query: 157 AHSGPSKEAHGAMSVTYRSSSCFEPRHETADSIGQYCCGSRRICSLPTRRSAASWVLQEG 336
A +G KE AM V R + + + S GS C L + + + G
Sbjct: 104 AAAGGGKETTAAMRVRRRREASSAAARDASSSAAGGELGSDARCELSSGGKRSDDLNHRG 163
Query: 337 DNDGREER 360
+ GREER
Sbjct: 164 EKKGREER 171
>10_08_0851 -
21065832-21065948,21066361-21066705,21067181-21067489,
21067574-21067648,21067754-21067917,21067994-21068432
Length = 482
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 46 GASTLQQTPSLDASSALRPFISRTRFS*MQTGSRRLRAHSGP 171
G + TPS+DA + R F + FS GS HSGP
Sbjct: 20 GCCSSSTTPSMDAVNLSRTFSDVSSFSEEHGGSGSSVDHSGP 61
>01_04_0130 +
16462428-16463210,16463644-16463796,16464707-16464784,
16465229-16465348,16465419-16465585,16465683-16465710
Length = 442
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 239 KLQTVLDNIVVAPGEFAACQLEEVRQVGSYKKGTMMAG-KNVADIVVIMKTLPT 397
K+QTV++ I ++ QLE + + S + +G + D+ ++K+LPT
Sbjct: 387 KIQTVVNKIDAIQNDYRTMQLEVLAGIDSLVTTVIESGLRFQVDLSTVIKSLPT 440
>12_01_0257 + 1898950-1899636
Length = 228
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 295 PTRRSAASWVLQEGDNDG 348
PTRR+AASW+ D DG
Sbjct: 58 PTRRTAASWLAVTFDGDG 75
>11_01_0675 - 5508815-5511277
Length = 820
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -3
Query: 430 NLIGESLDSLFRWQSFHDDYDISNVLPG 347
NL+ ES+ ++ WQSF + D++ LPG
Sbjct: 158 NLVIESIPDVYLWQSFDEPTDLA--LPG 183
>05_04_0375 +
20750170-20751011,20751707-20751865,20752894-20753146,
20753287-20753316
Length = 427
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 1 RHRSWWTRYPRPGRDGASTLQQ 66
R R WW P P GAS+L++
Sbjct: 33 RRRWWWWAAPLPSASGASSLER 54
>04_01_0070 -
706640-706747,707221-707307,707397-707502,707585-707693,
707766-708145,708508-708601,709351-709475,709633-709674,
710822-710892,710979-711060,711157-711277,712404-712713
Length = 544
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 89 PPFDLLLAEPAFPRCKPAPD 148
PPF L LA P FP P PD
Sbjct: 36 PPFLLDLASPPFPPKNPRPD 55
>03_01_0363 +
2827990-2828055,2828215-2829306,2829715-2829837,
2829994-2830110,2830248-2830429,2830558-2830744,
2830846-2831055,2831177-2831305,2832179-2832247,
2832751-2832873,2832957-2833007,2833101-2833250
Length = 832
Score = 27.1 bits (57), Expect = 8.5
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +2
Query: 278 GEFAACQLEEVRQVGSYKKGTMMA----GKNVADIVVIMKTLPTKEAVEGLSNKVNEEVN 445
GE E V V K G ++A GK V V+ +T ++A + K + +
Sbjct: 111 GEIPRQSKERVATVKFNKNGNLVACQVAGKTVDIYRVLDETEAARKAKRRMHRKKEKALA 170
Query: 446 KLMNAEGSGAXV 481
K M AEG+G +
Sbjct: 171 KSMAAEGNGTVI 182
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,652,499
Number of Sequences: 37544
Number of extensions: 328048
Number of successful extensions: 1022
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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