Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0951
(501 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7266| Best HMM Match : UPAR_LY6 (HMM E-Value=0.015) 87 1e-17
SB_34271| Best HMM Match : RVT_1 (HMM E-Value=3.4e-07) 31 0.53
SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_27467| Best HMM Match : ANF_receptor (HMM E-Value=6.9e-19) 29 1.6
SB_2703| Best HMM Match : PMP22_Claudin (HMM E-Value=2.5) 29 1.6
SB_59443| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 29 2.2
SB_54562| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06) 29 2.2
SB_49727| Best HMM Match : RVT_1 (HMM E-Value=4.5e-07) 29 2.2
SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05) 29 2.2
SB_36517| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06) 29 2.2
SB_22667| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 29 2.2
SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11) 29 2.2
SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_4623| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 29 2.2
SB_59576| Best HMM Match : rve (HMM E-Value=3.7e-14) 29 2.2
SB_55917| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_35469| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_34709| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 29 2.2
SB_30683| Best HMM Match : rve (HMM E-Value=1.9e-13) 29 2.2
SB_4973| Best HMM Match : RVT_1 (HMM E-Value=8.6e-11) 29 2.2
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014) 29 2.8
SB_39051| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-21) 29 2.8
SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 29 2.8
SB_17286| Best HMM Match : RVT_1 (HMM E-Value=1.5e-05) 29 2.8
SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14) 29 2.8
SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_4748| Best HMM Match : RVT_1 (HMM E-Value=0.0022) 29 2.8
SB_1237| Best HMM Match : rve (HMM E-Value=0.00029) 29 2.8
SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041) 29 2.8
SB_46040| Best HMM Match : PTN_MK_N (HMM E-Value=5.4) 29 2.8
SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056) 29 2.8
SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08) 29 2.8
SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07) 29 2.8
SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12) 29 2.8
SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097) 29 2.8
SB_27036| Best HMM Match : RVT_1 (HMM E-Value=0.00041) 29 2.8
SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07) 29 2.8
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14) 29 2.8
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 28 3.8
SB_17025| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_49176| Best HMM Match : Suf (HMM E-Value=0.6) 28 5.0
SB_22135| Best HMM Match : Plectin (HMM E-Value=6.7) 28 5.0
SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38) 27 6.6
SB_12088| Best HMM Match : EGF (HMM E-Value=0.16) 27 6.6
SB_47628| Best HMM Match : HEAT (HMM E-Value=1.3e-24) 27 6.6
SB_46699| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38) 27 6.6
SB_40517| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_7389| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38) 27 6.6
SB_24397| Best HMM Match : No HMM Matches (HMM E-Value=.) 24 8.1
SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_7266| Best HMM Match : UPAR_LY6 (HMM E-Value=0.015)
Length = 513
Score = 86.6 bits (205), Expect = 1e-17
Identities = 44/77 (57%), Positives = 59/77 (76%)
Frame = +2
Query: 167 ALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVVAPGEFAACQLEEVRQVGSYKKGTMM 346
ALLKR+T+L PS +QA V +LVTK+ +VLDN++V P + A +EEVR VGS+KKGTM+
Sbjct: 378 ALLKRNTKLTPSQQEQALVQNLVTKVTSVLDNLIVDP-DTAEFGVEEVRAVGSHKKGTML 436
Query: 347 AGKNVADIVVIMKTLPT 397
G +AD+ VI+K LPT
Sbjct: 437 LGHPIADLTVILKRLPT 453
>SB_34271| Best HMM Match : RVT_1 (HMM E-Value=3.4e-07)
Length = 303
Score = 31.1 bits (67), Expect = 0.53
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP LTRR
Sbjct: 82 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLTRR 124
>SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 306 KCGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
+C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 625 RCHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 668
>SB_27467| Best HMM Match : ANF_receptor (HMM E-Value=6.9e-19)
Length = 922
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 197 PSPTDQAAVLSLVTKLQTVLD-NIVVAPGE--FAACQLEEVRQVGSYKKGTMMAGKNVAD 367
PS Q + SLVTK++T D N++V G+ + LEEVR+ G K T +A + ++
Sbjct: 345 PSTGYQTKIASLVTKIKTANDVNVIVLWGDPTTSIAFLEEVRKQGVTGK-TWLAPEGWSE 403
Query: 368 IVVIMK 385
+ K
Sbjct: 404 ATSLFK 409
>SB_2703| Best HMM Match : PMP22_Claudin (HMM E-Value=2.5)
Length = 281
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 220 CFEPRHETADSIGQYCCGSRRICSLPTRRSAASWVLQEGDNDGREERC 363
CFE RH D++ + CG P R S W + + G E+ C
Sbjct: 49 CFEVRHNETDALIKENCGDWFEGGFPDRPSGRLWNVHLRNRAGLEKFC 96
>SB_59443| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 942
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 82 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 124
>SB_54562| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06)
Length = 909
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 390 CHRMVVTRKQDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 432
>SB_49727| Best HMM Match : RVT_1 (HMM E-Value=4.5e-07)
Length = 1286
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 621 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 663
>SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05)
Length = 1104
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 616 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 658
>SB_36517| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06)
Length = 817
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 434 CHRMVVTRKQDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 476
>SB_22667| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 795
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 471 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 513
>SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11)
Length = 1213
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 254 CHRMVVTRKQDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 296
>SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1269
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 476 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 518
>SB_4623| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 452
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 184 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 226
>SB_59576| Best HMM Match : rve (HMM E-Value=3.7e-14)
Length = 707
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 104 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 146
>SB_55917| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1412
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 564 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 606
>SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 82 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 124
>SB_35469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 906
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 638 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 680
>SB_34709| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 436
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 236 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 278
>SB_30683| Best HMM Match : rve (HMM E-Value=1.9e-13)
Length = 776
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 456 CHRMVVTRKQDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 498
>SB_4973| Best HMM Match : RVT_1 (HMM E-Value=8.6e-11)
Length = 296
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 28 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 70
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 612 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 654
>SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014)
Length = 471
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 305 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 347
>SB_39051| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-21)
Length = 1405
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 564 CHRMVITRKQNGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 606
>SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1441
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 603 CHRMVITRKQNGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 645
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 653 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 695
>SB_17286| Best HMM Match : RVT_1 (HMM E-Value=1.5e-05)
Length = 288
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 58 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 100
>SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14)
Length = 1447
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 621 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 663
>SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 850
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 386 CHRMVITRKQNGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 428
>SB_4748| Best HMM Match : RVT_1 (HMM E-Value=0.0022)
Length = 1012
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 336 CHRMVITRKQNGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 378
>SB_1237| Best HMM Match : rve (HMM E-Value=0.00029)
Length = 1026
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 358 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 400
>SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041)
Length = 1155
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 382 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 424
>SB_46040| Best HMM Match : PTN_MK_N (HMM E-Value=5.4)
Length = 248
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 160 HSGPSKEAHGAMSVTYRSSSCFEPRHETADSIGQ 261
H P K AHG + + +R SC E R ++ + Q
Sbjct: 63 HGKPVKSAHGDIGLHHREPSCSEIRGDSCEDDAQ 96
>SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056)
Length = 437
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 164 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 206
>SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08)
Length = 1201
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 655 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 697
>SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07)
Length = 1253
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 641 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 683
>SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12)
Length = 1067
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 579 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 621
>SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097)
Length = 812
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 713 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 755
>SB_27036| Best HMM Match : RVT_1 (HMM E-Value=0.00041)
Length = 1059
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 555 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 597
>SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07)
Length = 493
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 210 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 252
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 636 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 678
>SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14)
Length = 865
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 309 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 440
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 102 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 144
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 28.3 bits (60), Expect = 3.8
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 92 PFDLLL-AEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTV 253
PF L++ AE R KPAP + H L P P + S+V K Q V
Sbjct: 417 PFALVMEAEREHARAKPAPVQDRNEAKITTEHVRLTPVPGIVVKIESMVDKPQFV 471
>SB_17025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 197 PSPTDQAAVLSLVTKLQTVLDNIVVAPGEF 286
PSP L VT ++ +LD + +PGEF
Sbjct: 48 PSPQTTGPDLEAVTFVKDILDQLTESPGEF 77
>SB_49176| Best HMM Match : Suf (HMM E-Value=0.6)
Length = 594
Score = 27.9 bits (59), Expect = 5.0
Identities = 31/102 (30%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Frame = +1
Query: 25 YPRPGRDGASTLQQTPSLDAS-SALRPFISRTRFS*MQTGSRR--LRAHSGPSKEAHGAM 195
+PR G D AS++ PS D S S+ F S R + G R L SG
Sbjct: 450 FPRGGDDDASSIGYAPSDDTSDSSAAYFGSFPRHHEAKFGYSRPKLIRLSGDFPGIRNLE 509
Query: 196 SVTYRSSSCFEPRHETA-DSIGQYCCGSRRICSLPTRRSAAS 318
+ + S DS + GSR + SLP RS S
Sbjct: 510 KMRRKKQSMGSTSSGAGIDSTSSFRSGSRSLSSLPESRSLTS 551
>SB_22135| Best HMM Match : Plectin (HMM E-Value=6.7)
Length = 60
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 373 YDISNVLPGHHCPLLVGPN 317
YD V+PG H +LVGPN
Sbjct: 3 YDECEVMPGPHLNVLVGPN 21
>SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)
Length = 1541
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +2
Query: 104 LLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVVAPGE 283
LL FPRC P+ LT + ++ C + Q + L +V + V + ++A
Sbjct: 628 LLENLKFPRCLKPPNFGTLTSTQVCNFSDACHNGIGQVSYLRMVNEKGEVHVSFLMAKSR 687
Query: 284 FA 289
A
Sbjct: 688 VA 689
>SB_12088| Best HMM Match : EGF (HMM E-Value=0.16)
Length = 343
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 400 FRWQSFHDDYDISNVLPGHH 341
FR QS+ DDY ++ PG H
Sbjct: 187 FRGQSYLDDYSVNEEAPGDH 206
>SB_47628| Best HMM Match : HEAT (HMM E-Value=1.3e-24)
Length = 921
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 266 VVAPGEFAACQLEEVRQVGSYKKGTMMAGKNVADIVVIMKTLPTKEAV 409
V PG + ACQ E +R V + + A + ++ ++ K +P++E V
Sbjct: 122 VKGPGVYLACQEEIIRSVADNLERKLPADEVGSNEHLVQKLVPSQEEV 169
>SB_46699| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)
Length = 517
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +2
Query: 104 LLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVVAPGE 283
LL FPRC P+ LT + ++ C + Q + L +V + V + ++A
Sbjct: 286 LLENLKFPRCLKPPNFGTLTSTQVCNFSDACHNGIGQVSYLRMVNEKGEVHVSFLMAKSR 345
Query: 284 FA 289
A
Sbjct: 346 VA 347
>SB_40517| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 353 KNVADIVVIMKTLPTKEAVEGLSNKVNEEVNK 448
K + +++ M + K+ VEGL V E+VNK
Sbjct: 145 KEIKNLIPGMNLVQAKKFVEGLPQNVREKVNK 176
>SB_7389| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)
Length = 308
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +2
Query: 104 LLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVVAPGE 283
LL FPRC P+ LT + ++ C + Q + L +V + V + ++A
Sbjct: 77 LLENLKFPRCLKPPNFGTLTSTQVCNFSDACHNGIGQVSYLRMVNEKGEVHVSFLMAKSR 136
Query: 284 FA 289
A
Sbjct: 137 VA 138
>SB_24397| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 211
Score = 24.2 bits (50), Expect(2) = 8.1
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +1
Query: 148 RLRAHSGPSKEAHGAMSVTYRSSSCFEPRHETADSIGQYCCGSR 279
++R SG S G + R S C + I CCG+R
Sbjct: 121 QIRRKSGISPACCGTRNYDARFSMCCGGQVRRKSGISPACCGTR 164
Score = 21.4 bits (43), Expect(2) = 8.1
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1
Query: 265 CCGSRRICS 291
CCG R+CS
Sbjct: 201 CCGYNRVCS 209
>SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -1
Query: 381 MMTTISATFFPAIIVPFL*DPTCRTSSSWQAANSPGATTILSNTV 247
M TT+S P+I V ++ P+ TS Q + S TT LS V
Sbjct: 985 MNTTLSLLPDPSINVTYVKSPSLTTSGLLQPSPSANVTTELSKPV 1029
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,062,921
Number of Sequences: 59808
Number of extensions: 347856
Number of successful extensions: 970
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1087245449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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