BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0951
(501 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051610-1|AAK93034.1| 396|Drosophila melanogaster GH25564p pro... 157 8e-39
AE014297-1520|AAF54812.1| 396|Drosophila melanogaster CG5641-PA... 157 8e-39
AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA... 29 4.7
>AY051610-1|AAK93034.1| 396|Drosophila melanogaster GH25564p
protein.
Length = 396
Score = 157 bits (381), Expect = 8e-39
Identities = 77/128 (60%), Positives = 97/128 (75%), Gaps = 2/128 (1%)
Frame = +2
Query: 86 RPPFDLLLAEPAFPRCKPAP--DDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLD 259
R PFDL LAE FP+ A DDS LT ALLKR+ +L P+P++Q A+ +LVTK+Q VLD
Sbjct: 27 RHPFDLTLAEVFFPKVPSAGAVDDSALTAALLKRNQDLSPTPSEQTAIGNLVTKVQAVLD 86
Query: 260 NIVVAPGEFAACQLEEVRQVGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKVNEE 439
N+VVAPG+ CQLEEVRQVGS+KKGT++ G NVAD+VVI+KTLPTKEAV+ L+ KV +
Sbjct: 87 NLVVAPGDLTTCQLEEVRQVGSFKKGTILTGNNVADVVVILKTLPTKEAVDALAKKVEAD 146
Query: 440 VNKLMNAE 463
+ M E
Sbjct: 147 LKASMKTE 154
>AE014297-1520|AAF54812.1| 396|Drosophila melanogaster CG5641-PA
protein.
Length = 396
Score = 157 bits (381), Expect = 8e-39
Identities = 77/128 (60%), Positives = 97/128 (75%), Gaps = 2/128 (1%)
Frame = +2
Query: 86 RPPFDLLLAEPAFPRCKPAP--DDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLD 259
R PFDL LAE FP+ A DDS LT ALLKR+ +L P+P++Q A+ +LVTK+Q VLD
Sbjct: 27 RHPFDLTLAEVFFPKVPSAGAVDDSALTAALLKRNQDLSPTPSEQTAIGNLVTKVQAVLD 86
Query: 260 NIVVAPGEFAACQLEEVRQVGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKVNEE 439
N+VVAPG+ CQLEEVRQVGS+KKGT++ G NVAD+VVI+KTLPTKEAV+ L+ KV +
Sbjct: 87 NLVVAPGDLTTCQLEEVRQVGSFKKGTILTGNNVADVVVILKTLPTKEAVDALAKKVEAD 146
Query: 440 VNKLMNAE 463
+ M E
Sbjct: 147 LKASMKTE 154
>AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA,
isoform A protein.
Length = 1218
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 210 SVGDGHSSVCLFRRA*VSTESSGAGLHLGKAG-SANKRSKGGRSIKTRGLL 61
S+ SS + R + SSG + G G S+N S GG S T GLL
Sbjct: 629 SISSSASSASFYNRLLLLDNSSGDAVVGGNGGGSSNISSSGGASSGTNGLL 679
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,448,904
Number of Sequences: 53049
Number of extensions: 518693
Number of successful extensions: 1545
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1543
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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