Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0951
         (501 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    24   0.77 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    24   0.77 
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   5.5  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   7.2  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   7.2  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   7.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.2  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 169 PSKEAHGAMSVTYRSSSCFEPRHE 240
           P +  HG ++ T   +SC++ R+E
Sbjct: 82  PIEPWHGVLNATVLPNSCYQERYE 105


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 169 PSKEAHGAMSVTYRSSSCFEPRHE 240
           P +  HG ++ T   +SC++ R+E
Sbjct: 82  PIEPWHGVLNATVLPNSCYQERYE 105


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = +2

Query: 338 TMMAGKNVADIVVIMKTLPTKEAVEGLSNKVNEEVNKLM 454
           T  A +        M++       E L N+ NE++ KLM
Sbjct: 617 TSSASRENTSNTTSMESFKPPTLTESLLNRHNEDMEKLM 655


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 196 SVTYRSSSCFEP 231
           SVT ++++CFEP
Sbjct: 164 SVTGKTTACFEP 175


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 92  PFDLLLAEPAFPRCKPAPDDSVL 160
           P DL+  EP+ P C+  P   +L
Sbjct: 74  PKDLVYLEPSPPFCEKNPKLGIL 96


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 92  PFDLLLAEPAFPRCKPAPDDSVL 160
           P DL+  EP+ P C+  P   +L
Sbjct: 75  PKDLVYLEPSPPFCEKNPKLGIL 97


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 128 RCKPAPDDSVLTQALLKRHTELCPSPT 208
           +C+   D + L+  ++ R  EL P PT
Sbjct: 177 KCEVLYDIAPLSDFVIHRSPELVPMPT 203


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 448 LVHLLVNLIGESLDSLFRWQSFHDDY 371
           LVHL      E+ D L  W++  D++
Sbjct: 253 LVHLYTRDQSETYDVLRSWRNLMDEH 278


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,178
Number of Sequences: 438
Number of extensions: 3025
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)