Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0950
(416 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 22 2.1
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 4.8
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 4.8
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 4.8
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 21 4.8
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 4.8
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 4.8
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 4.8
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 4.8
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 4.8
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 4.8
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 6.4
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 22.2 bits (45), Expect = 2.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 262 TTRPPRSTAKPSTQPKTTP 318
TT + T KPST+P P
Sbjct: 171 TTLTTKFTTKPSTKPTNKP 189
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 271 PPRSTAKPSTQPKTTPGRRSTLSRP 345
PPRST ST + + S L+ P
Sbjct: 122 PPRSTPPLSTPSNSNATKSSGLTSP 146
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 271 PPRSTAKPSTQPKTTPGRRSTLSRP 345
PPRST ST + + S L+ P
Sbjct: 122 PPRSTPPLSTPSNSNATKSSGLTSP 146
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 271 PPRSTAKPSTQPKTTPGRRSTLSRP 345
PPRST ST + + S L+ P
Sbjct: 122 PPRSTPPLSTPSNSNATKSSGLTSP 146
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 21.0 bits (42), Expect = 4.8
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2
Query: 160 AAGASPWATTP 128
AAGASP++ TP
Sbjct: 307 AAGASPYSGTP 317
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 271 PPRSTAKPSTQPKTTPGRRSTLSRP 345
PPRST ST + + S L+ P
Sbjct: 122 PPRSTPPLSTPSNSNATKSSGLTSP 146
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 271 PPRSTAKPSTQPKTTPGRRSTLSRP 345
PPRST ST + + S L+ P
Sbjct: 122 PPRSTPPLSTPSNSNATKSSGLTSP 146
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 271 PPRSTAKPSTQPKTTPGRRSTLSRP 345
PPRST ST + + S L+ P
Sbjct: 78 PPRSTPPLSTPSNSNATKSSGLTSP 102
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 271 PPRSTAKPSTQPKTTPGRRSTLSRP 345
PPRST ST + + S L+ P
Sbjct: 122 PPRSTPPLSTPSNSNATKSSGLTSP 146
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.0 bits (42), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 271 PPRSTAKPSTQPKTTPGRRSTLSRP 345
PPRST ST + + S L+ P
Sbjct: 122 PPRSTPPLSTPSNSNATKSSGLTSP 146
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 271 PPRSTAKPSTQPKTTPGRRSTLSRP 345
PPRST ST + + S L+ P
Sbjct: 122 PPRSTPPLSTPSNSNATKSSGLTSP 146
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 20.6 bits (41), Expect = 6.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 346 TVLTASTACQEWSSAALTA 290
T LTA T W S LTA
Sbjct: 1110 TTLTAQTIRVSWVSPPLTA 1128
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,714
Number of Sequences: 336
Number of extensions: 459
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 9174063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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