Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0950
(416 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.29
SB_23942| Best HMM Match : 5-nucleotidase (HMM E-Value=4) 29 2.0
SB_8710| Best HMM Match : PKD_channel (HMM E-Value=0) 28 2.7
SB_22482| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 28 3.6
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.7
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 27 4.7
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 27 6.2
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 27 8.2
>SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1468
Score = 31.5 bits (68), Expect = 0.29
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 262 TTRPPRSTAKPSTQP-KTTPGRRSTLSRPSRHSWTV 366
TT PPR+T++P+T+P +TTP T + H TV
Sbjct: 1134 TTEPPRTTSEPTTEPLRTTP--EPTTEPTTEHVTTV 1167
Score = 30.7 bits (66), Expect = 0.50
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +1
Query: 262 TTRPPRSTAKPSTQ-PKTTPGRRSTLSR 342
TT PPR+T +P+T+ P+TTP + SR
Sbjct: 725 TTEPPRTTPEPTTEPPRTTPEPTTEPSR 752
Score = 30.7 bits (66), Expect = 0.50
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +1
Query: 262 TTRPPRSTAKPSTQP-KTTPGRRSTLSR 342
TT PPR+T +P+T+P +TTP + SR
Sbjct: 736 TTEPPRTTPEPTTEPSRTTPELTTEPSR 763
Score = 30.7 bits (66), Expect = 0.50
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +1
Query: 262 TTRPPRSTAKPSTQ-PKTTPGRRSTLSR 342
TT PPR+T +P+T+ P+TTP + SR
Sbjct: 1090 TTEPPRTTPEPTTEPPRTTPEPTTEPSR 1117
Score = 30.3 bits (65), Expect = 0.67
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +1
Query: 262 TTRPPRSTAKPSTQ-PKTTPGRRSTLSR 342
TT PPR+T +P+T+ P+TTP + SR
Sbjct: 360 TTEPPRTTPEPTTEPPQTTPEPTTEPSR 387
Score = 30.3 bits (65), Expect = 0.67
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 262 TTRPPRSTAKPSTQPKTTPGRRSTLSRPSR 351
TT PPR+T +P+T+P T +T PSR
Sbjct: 1101 TTEPPRTTPEPTTEPSRTKPEPTT--EPSR 1128
Score = 28.7 bits (61), Expect = 2.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 262 TTRPPRSTAKPSTQPKTTPGRRSTLSRPSR 351
TT PP++T +P+T+P T +T PSR
Sbjct: 371 TTEPPQTTPEPTTEPSRTKPELTT--EPSR 398
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Frame = +1
Query: 253 VNITTRP---PRSTAKPSTQPKTT 315
+ +T RP PRST P T+P+TT
Sbjct: 546 IKVTRRPEDRPRSTRSPDTRPRTT 569
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Frame = +1
Query: 253 VNITTRP---PRSTAKPSTQPKTT 315
+ +T RP PRST P T+P+TT
Sbjct: 911 IKVTRRPEDRPRSTRSPDTRPRTT 934
>SB_23942| Best HMM Match : 5-nucleotidase (HMM E-Value=4)
Length = 735
Score = 28.7 bits (61), Expect = 2.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 262 TTRPPRSTAKPSTQPKTTPGRRSTLSRPSRHS 357
TT PR+T T +TT R+T P RH+
Sbjct: 263 TTTRPRTTPTSITATRTTTRTRATTGSPGRHN 294
>SB_8710| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 1627
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 265 TRPPRSTAKPSTQPKTTPGRRSTLSRPSRHSW 360
T PP +TA P+T+ T P R T P+ W
Sbjct: 382 TDPP-TTAPPTTKRPTNPPRNLTTETPTTRQW 412
>SB_22482| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 196 AAPWRSPGEMVGAAGASPWATTP*ATSPWL*C 101
A+PWRS E+ A GA ++ PWL C
Sbjct: 196 ASPWRSLPELTNAGGARCRDSSRPRRGPWLVC 227
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 262 TTRPPRSTAKPST--QPKTTPGRRSTLSRPS 348
TT PP STA P T P+TT STL+ S
Sbjct: 44 TTVPPESTAAPDTTVAPETTVAIESTLALES 74
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +1
Query: 262 TTRPPRSTAKPST--QPKTTPGRRST 333
TT PP +TAKP T P+TT ++T
Sbjct: 1874 TTTPPETTAKPETTGAPETTSAPKTT 1899
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +1
Query: 262 TTRPPRSTAKPST--QPKTTPGRRST 333
TT PP +TAKP T P+TT ++T
Sbjct: 2348 TTTPPETTAKPETTGAPETTSAPKTT 2373
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +1
Query: 262 TTRPPRSTAKPST--QPKTTPGRRST 333
TT PP +TAKP T P+TT ++T
Sbjct: 2891 TTTPPETTAKPETTGAPETTSAPKTT 2916
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +1
Query: 262 TTRPPRSTAKPST--QPKTTPGRRST 333
TT PP +TAKP T P+TT ++T
Sbjct: 3029 TTTPPETTAKPETTGAPETTSAPKTT 3054
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 253 VNITTRPPRSTAKPST--QPKTTPGRRSTLS 339
V+ TT PP +TA P T +P+TT +T++
Sbjct: 1054 VSETTAPPETTASPETTVEPETTVAPETTVT 1084
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 27.5 bits (58), Expect = 4.7
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 262 TTRPPRSTAKPST--QPKTTPGRRSTLSRPS 348
TT PP +TA P T P+TT STL+ S
Sbjct: 2380 TTLPPETTAAPDTTLAPETTVALESTLALES 2410
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 253 VNITTRPPRSTAKPST--QPKTTPGRRSTLS 339
V+ TT PP +TA P T +P+TT +T++
Sbjct: 2569 VSETTAPPETTASPETTVEPETTVAPETTVT 2599
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 262 TTRPPRSTAKPST--QPKTTPGRRSTLSRPS 348
TT PP +TA P T P+TT STL+ S
Sbjct: 853 TTVPPETTAAPDTTLAPETTVALESTLALES 883
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 27.1 bits (57), Expect = 6.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 265 TRPPRSTAKPSTQPKTTP 318
T+PP + P T PKTTP
Sbjct: 651 TKPPLAPYPPKTSPKTTP 668
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 27.1 bits (57), Expect = 6.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 262 TTRPPRSTAKPSTQPKTTPGRRST 333
+T PP++T PS Q T+P + +T
Sbjct: 695 STSPPQTTTSPSQQTSTSPPQTTT 718
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 262 TTRPPRSTAKPST--QPKTTPGRRSTLSRPS 348
TT PP +TA P T P+TT STL+ S
Sbjct: 2738 TTVPPETTAAPDTTLAPETTVSLESTLALES 2768
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 262 TTRPPRSTAKPSTQPKTTPGRRSTLSRPSR 351
TT PP +T P+T+ TT TL R S+
Sbjct: 633 TTDPPTTTPIPTTEATTTRSLYYTLKRKSQ 662
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,804,432
Number of Sequences: 59808
Number of extensions: 59841
Number of successful extensions: 501
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 777158991
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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