Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0950
         (416 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   1.0  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   3.2  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   4.2  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    20   9.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    20   9.7  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 274 PRSTAKPSTQPKTT 315
           P +TA P+T+P TT
Sbjct: 380 PTTTASPTTEPSTT 393


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +1

Query: 268 RPPRSTAKPSTQPKTTPGRRSTLSRP 345
           RPP    +   +PK  PG    +  P
Sbjct: 54  RPPHPRLRREAEPKAEPGNNRPIYIP 79


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 353 CLDGLDSVDRLPGVVFGCVDGLAVDLGGLVVI 258
           C++ L    +L G VFG V  +A+ +  L+ I
Sbjct: 182 CVEALKDTVKLAGTVFGSV-AIAIAIVELIGI 212


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 265 TRPPRSTAKPSTQ 303
           TRP R  A PS+Q
Sbjct: 17  TRPSRGNAVPSSQ 29


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 265 TRPPRSTAKPSTQ 303
           TRP R  A PS+Q
Sbjct: 17  TRPSRGNAVPSSQ 29


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,613
Number of Sequences: 438
Number of extensions: 446
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)