Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0949
         (568 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O96187 Cluster: Putative uncharacterized protein PFB047...    34   2.7  
UniRef50_Q47U94 Cluster: Putative membrane protein; n=1; Colwell...    33   4.7  

>UniRef50_O96187 Cluster: Putative uncharacterized protein PFB0470w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFB0470w - Plasmodium falciparum
           (isolate 3D7)
          Length = 1346

 Score = 33.9 bits (74), Expect = 2.7
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = +3

Query: 63  YFVFY*LSSDPPLLRFGNCNLLLISPLFNGCYYTYKPSSSITLSIKKTHQNPLRSFKD 236
           Y+ +Y   +DP     G CNL  I   +N  Y  Y   SS++  +K   Q  L+ FKD
Sbjct: 688 YYYYYYYDNDPSK---GYCNLFEILYGYNSGYNLYTSFSSLSYVVKYNEQMFLKKFKD 742


>UniRef50_Q47U94 Cluster: Putative membrane protein; n=1; Colwellia
           psychrerythraea 34H|Rep: Putative membrane protein -
           Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
           (Vibriopsychroerythus)
          Length = 462

 Score = 33.1 bits (72), Expect = 4.7
 Identities = 13/37 (35%), Positives = 25/37 (67%)
 Frame = -3

Query: 524 LLYWITLIQFYCKI*IIFFYSLKLMINSSHSLFIYVI 414
           LLYW+T++  +C   IIF ++  + I ++ S FI+++
Sbjct: 103 LLYWLTILLLFCSS-IIFVFNANIKIAAAASYFIFLL 138


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 443,049,614
Number of Sequences: 1657284
Number of extensions: 7794889
Number of successful extensions: 13372
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13370
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)