Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0949
         (568 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        24   3.0  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        24   3.0  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        24   3.0  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        24   3.0  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   3.0  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   5.3  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   9.2  

>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 138 EKSVINYSFRSEARAGR*IINKIQNTQQKFYLIIKLIFVFSCA 10
           EK+V +Y F  E    R  + K+QN Q K   +I   F  + +
Sbjct: 123 EKNVCDYRFSYELANNRETLLKVQNLQCKEINLIAAGFTIAAS 165


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 138 EKSVINYSFRSEARAGR*IINKIQNTQQKFYLIIKLIFVFSCA 10
           EK+V +Y F  E    R  + K+QN Q K   +I   F  + +
Sbjct: 123 EKNVCDYRFSYELANNRETLLKVQNLQCKEINLIAAGFTIAAS 165


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 138 EKSVINYSFRSEARAGR*IINKIQNTQQKFYLIIKLIFVFSCA 10
           EK+V +Y F  E    R  + K+QN Q K   +I   F  + +
Sbjct: 123 EKNVCDYRFSYELANNRETLLKVQNLQCKEINLIAAGFTIAAS 165


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 138 EKSVINYSFRSEARAGR*IINKIQNTQQKFYLIIKLIFVFSCA 10
           EK+V +Y F  E    R  + K+QN Q K   +I   F  + +
Sbjct: 123 EKNVCDYRFSYELANNRETLLKVQNLQCKEINLIAAGFTIAAS 165


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 138 EKSVINYSFRSEARAGR*IINKIQNTQQKFYLIIKLIFVFSCA 10
           EK+V +Y F  E    R  + K+QN Q K   +I   F  + +
Sbjct: 699 EKNVCDYRFSYELANNRETLLKVQNLQCKEINLIAAGFTIAAS 741


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1

Query: 133 ISNKLQFPKRSKGGSLDN 80
           IS KLQ+  + K GSLDN
Sbjct: 713 ISTKLQWNAKPKIGSLDN 730


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = -2

Query: 309 KNPTIV*NKVAFSVPISVRPYVCLNL*NYATDFD 208
           + PT V   V F VP  V  YV      Y TDFD
Sbjct: 369 QTPTDVLTDV-FQVPPDVEKYVGFCGKEYGTDFD 401


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,641
Number of Sequences: 2352
Number of extensions: 7776
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)