Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0948
         (688 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23JN2 Cluster: Putative uncharacterized protein; n=1; ...    37   0.53 
UniRef50_Q6LFB1 Cluster: Putative uncharacterized protein; n=1; ...    36   0.70 
UniRef50_Q09726 Cluster: Uncharacterized protein C31A2.06; n=1; ...    35   2.1  
UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahym...    34   2.8  
UniRef50_Q1CU43 Cluster: Outer membrane protein HofC; n=4; Helic...    33   4.9  
UniRef50_Q5CQM0 Cluster: Large low complexity protein; n=2; Cryp...    33   6.5  

>UniRef50_Q23JN2 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1809

 Score = 36.7 bits (81), Expect = 0.53
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = -2

Query: 384  LVTFKTHDNIVCFCSQKYITAYHYNILYNLGYFKYDVIDLYVNC*SIY 241
            L   + H N + +C+ KYI  Y+YN  + + Y+ ++++ +YV    IY
Sbjct: 1585 LFQLRRHKNTLNYCTVKYIYGYYYN-EFKIKYYYWEILRIYVKILVIY 1631


>UniRef50_Q6LFB1 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1806

 Score = 36.3 bits (80), Expect = 0.70
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = +1

Query: 415 ISWNCKFVHYYDCNLYFYNHKFRQDYTIKNIKKDKQYLIYSQFDHRRQEQKFDNK 579
           IS  CK    YD N+Y+YN K ++ Y   N  K   +LIY Q++  +      NK
Sbjct: 219 ISLECKNNIEYDNNIYYYNKKIQKFYGYVN--KQNDHLIYKQWNSYKNISTDQNK 271


>UniRef50_Q09726 Cluster: Uncharacterized protein C31A2.06; n=1;
           Schizosaccharomyces pombe|Rep: Uncharacterized protein
           C31A2.06 - Schizosaccharomyces pombe (Fission yeast)
          Length = 542

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +1

Query: 418 SWNCKFVHYYDCNLYFYNHKFRQDYTIKNIKKDKQYLIYSQFDHRRQEQ 564
           +W C  +  +  +++     FR+ Y + NI+  K   +YS  +H +Q +
Sbjct: 188 NWTCLSIENFGISIHVITKNFREYYKLDNIEHVKDETLYSDLEHGKQSR 236


>UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahymena
           thermophila SB210|Rep: KOW motif family protein -
           Tetrahymena thermophila SB210
          Length = 778

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 421 WNCKFVHYYDCNLYFYNHKFRQDYTIKNI 507
           + C+ +H Y   ++ +N KFR  YT++NI
Sbjct: 625 YQCQVIHVYKSLVFLFNPKFRDTYTVENI 653


>UniRef50_Q1CU43 Cluster: Outer membrane protein HofC; n=4;
           Helicobacter|Rep: Outer membrane protein HofC -
           Helicobacter pylori (strain HPAG1)
          Length = 528

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +1

Query: 421 WNCKFVHYYDCNLYFYNHKFRQDYTIKNI--KKDKQYLIYSQFDHRRQEQ 564
           WN  F +YY  N Y   H  R +    N+    D+ +++  +FD   QEQ
Sbjct: 153 WNGLFPNYYPANAYLPGHSRRYEVYKANLTYDSDRVHMVMGRFDVTEQEQ 202


>UniRef50_Q5CQM0 Cluster: Large low complexity protein; n=2;
            Cryptosporidium|Rep: Large low complexity protein -
            Cryptosporidium parvum Iowa II
          Length = 2099

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 204  FEQILNKFYFIFDKCF--NSSHINRLHHT*NNLDYIEYYSDKL 326
            +E+++    FI+  CF  N+S++N  H+   N  YIE+Y D L
Sbjct: 1694 WEELIEFTNFIYLYCFTNNNSNVNHYHYEIKNGRYIEFYKDIL 1736


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,493,076
Number of Sequences: 1657284
Number of extensions: 9669481
Number of successful extensions: 22795
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22779
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)