Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0948
         (688 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1)            31   0.87 
SB_183| Best HMM Match : IBR (HMM E-Value=0.015)                       29   3.5  
SB_26687| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.2  
SB_14926| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.2  
SB_29907| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.1  

>SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1)
          Length = 284

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -1

Query: 670 KIMHKRYIKSIKKTLHTPHTMYLRHT--RMHTIY 575
           +++H  Y   I  TLH PHT++  HT    HT Y
Sbjct: 67  RLLHIPYTLHIPHTLHIPHTLHTTHTLDTTHTKY 100



 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 661 HKRYIKSIKKTLHTPHTMYLRHTRMHT 581
           H RY   ++ TL T HT Y  HT +HT
Sbjct: 138 HIRYTLHVRHTLRTTHTTYATHT-VHT 163


>SB_183| Best HMM Match : IBR (HMM E-Value=0.015)
          Length = 228

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +1

Query: 427 CKFVHYYDCNLYFYNH-KFRQDYTIKNIKKDKQYLIY-SQFDHRRQEQKFDNK*YACV 594
           C F  +Y CN Y     +  +D   ++    ++YL Y ++F +  Q  KF++K Y+ V
Sbjct: 31  CGFTFWYSCNRYDEKEAQAARDAQSRSRSALERYLFYCNRFMNHAQSAKFESKLYSQV 88


>SB_26687| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 614

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 19/62 (30%), Positives = 26/62 (41%)
 Frame = -1

Query: 562 VLDVCGQIENRLNIVCLF*YFL*CNLGEICDYRSINYNHNSVQTYNSN*L*SNFDYCGTS 383
           +LD C   E+ L  VC    F   N+G+I  Y   N     +  + S    S  DYC + 
Sbjct: 468 ILDKCLSFEDHLKTVCKSARFHLRNIGKIRKYLDKNSTEILIHAFIS----SKLDYCNSL 523

Query: 382 SY 377
            Y
Sbjct: 524 LY 525


>SB_14926| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1638

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 426  IPTNYSRISTTAGPLVTFKTHDNIVCFCSQKYITAYHYNIL 304
            +  ++SR+ T    L TF+ + ++  FC+   +T Y Y  L
Sbjct: 1381 VELDFSRVKTELQSLFTFEHNASLEYFCTTHRLTFYEYQEL 1421


>SB_29907| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 157

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 625 HTPHTMYLRHTRMHTIYCQTFVLDVCGQIENRLN 524
           HTP+T Y R    +T Y   + L+    +E R+N
Sbjct: 121 HTPNTSYTRKQTPNTSYTCKYTLNTWNTLECRIN 154


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,002,525
Number of Sequences: 59808
Number of extensions: 306047
Number of successful extensions: 652
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)