Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0948
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025721-12|AAK29899.1|  278|Caenorhabditis elegans Hypothetical...    28   5.4  
U10438-12|ABB88244.1|  325|Caenorhabditis elegans Hypothetical p...    27   9.5  
U10438-11|AAL50321.1|  335|Caenorhabditis elegans Hypothetical p...    27   9.5  

>AC025721-12|AAK29899.1|  278|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.13 protein.
          Length = 278

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 8/20 (40%), Positives = 17/20 (85%)
 Frame = -2

Query: 315 YNILYNLGYFKYDVIDLYVN 256
           Y  L+++GYF YD++D++++
Sbjct: 81  YVFLFSMGYFIYDLLDMHIH 100


>U10438-12|ABB88244.1|  325|Caenorhabditis elegans Hypothetical
           protein B0280.1b protein.
          Length = 325

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = -1

Query: 670 KIMHKRYIKSIKKTLHTPHTMYLRHTRMHTIYCQTFVLDVCGQIENRLNIVCLF*YFL*C 491
           K +H  +I   +K  ++ H +   H R+  IY     +D+  Q+E R++   +  Y L C
Sbjct: 26  KDLHANFINQYEKNKNSYHYIMAEHLRVSGIYWCVNAMDLSKQLE-RMSTEEIVNYVLGC 84


>U10438-11|AAL50321.1|  335|Caenorhabditis elegans Hypothetical
           protein B0280.1a protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = -1

Query: 670 KIMHKRYIKSIKKTLHTPHTMYLRHTRMHTIYCQTFVLDVCGQIENRLNIVCLF*YFL*C 491
           K +H  +I   +K  ++ H +   H R+  IY     +D+  Q+E R++   +  Y L C
Sbjct: 26  KDLHANFINQYEKNKNSYHYIMAEHLRVSGIYWCVNAMDLSKQLE-RMSTEEIVNYVLGC 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,297,617
Number of Sequences: 27780
Number of extensions: 251655
Number of successful extensions: 512
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)