Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0948
(688 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 2.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 3.6
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 8.3
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 8.3
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 8.3
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 8.3
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 8.3
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 8.3
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 8.3
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 8.3
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 8.3
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 8.3
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 429 TIPTNYSRISTTAGPLVTFKTHDNIVC 349
+I TNY P+++F+ D I+C
Sbjct: 648 SIETNYECGLRFEDPMISFQPGDTIIC 674
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -1
Query: 472 DYRSINYNHNSVQTYNSN 419
+Y + N N+N+ YN+N
Sbjct: 326 NYNNYNNNYNNYNNYNNN 343
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 463 SINYNHNSVQTYNSN 419
S NYN+++ YN+N
Sbjct: 86 SNNYNYSNYNNYNNN 100
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 463 SINYNHNSVQTYNSN 419
S NYN+++ YN+N
Sbjct: 86 SNNYNYSNYNNYNNN 100
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 463 SINYNHNSVQTYNSN 419
S NYN+++ YN+N
Sbjct: 86 SNNYNYSNYNNYNNN 100
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 463 SINYNHNSVQTYNSN 419
S NYN+++ YN+N
Sbjct: 86 SNNYNYSNYNNYNNN 100
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 463 SINYNHNSVQTYNSN 419
S NYN+++ YN+N
Sbjct: 86 SNNYNYSNYNNYNNN 100
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 463 SINYNHNSVQTYNSN 419
S NYN+++ YN+N
Sbjct: 86 SNNYNYSNYNNYNNN 100
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 463 SINYNHNSVQTYNSN 419
S NYN+++ YN+N
Sbjct: 86 SNNYNYSNYNNYNNN 100
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 463 SINYNHNSVQTYNSN 419
S NYN+++ YN+N
Sbjct: 86 SNNYNYSNYNNYNNN 100
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 463 SINYNHNSVQTYNSN 419
S NYN+++ YN+N
Sbjct: 86 SNNYNYSNYNNYNNN 100
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 457 NYNHNSVQTYNSN 419
NYN+N+ YN N
Sbjct: 95 NYNNNNYNNYNYN 107
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,034
Number of Sequences: 438
Number of extensions: 3528
Number of successful extensions: 29
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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