Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0945
         (803 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_48676| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.029
SB_53769| Best HMM Match : Hepcidin (HMM E-Value=4.7)                  30   2.5  
SB_20665| Best HMM Match : 7tm_3 (HMM E-Value=1.8e-10)                 30   2.5  
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_27831| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.6e-11)         28   7.7  

>SB_48676| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 453

 Score = 36.3 bits (80), Expect = 0.029
 Identities = 24/83 (28%), Positives = 35/83 (42%)
 Frame = -3

Query: 774 EETETMLLLNKTKKIPSRSTNSQ*SNTKPAVVICHLLKVQNLDLFNKNTSARRGYVLEMV 595
           E  ET  LL     IP    +    ++       + LKV+  DLF    +A +GY L   
Sbjct: 348 ELDETKALLESCLTIPLEEADCSRGDSVLYATDSNKLKVELCDLFESYQTAAKGYNLRRH 407

Query: 594 GSVTLFLYNFFFRISANHLLVPY 526
            S+  FL N  +     +LL+ Y
Sbjct: 408 PSIRAFLLNAVYNSPEENLLISY 430


>SB_53769| Best HMM Match : Hepcidin (HMM E-Value=4.7)
          Length = 106

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = -1

Query: 614 DMSWKWSEALRCSYIIFSSEFLLITYWSLTI---KIRLCYHKYYK 489
           D  W+   AL C YI+F      I  WS  +    +R C+   +K
Sbjct: 62  DTGWETGLALNCIYIVFVLTEAAIAIWSAELCRRSVRCCFQNGFK 106


>SB_20665| Best HMM Match : 7tm_3 (HMM E-Value=1.8e-10)
          Length = 1514

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = -2

Query: 271 QTWKLKIRL---SPSFAPTTHVLRLKFVNIIQMLYVIFFQVLRCTRPPEFGRSIS 116
           +TWKL       +P     T ++ LK ++++   YVI+  V   T PP    S++
Sbjct: 554 KTWKLSTTFRARTPRKVEVTDLVMLKHLSLVTAAYVIYLLVWTLTIPPHVEGSVT 608


>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1031

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 193 IIQMLYVIFFQVLRCTRPPEFGRSISRIVDSFF 95
           II  L +    V+    PPEFG  I+ +++SFF
Sbjct: 45  IIPCLVLTGLSVMTFMLPPEFGERITLVIESFF 77


>SB_27831| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.6e-11)
          Length = 350

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
 Frame = -1

Query: 617 EDMSWKWSEALRCSYIIFSSEFLLITYWSLTIKIRLCYHKYYKIS----HFKFKEKKIYA 450
           ED+ ++W + +     I+ +E    T  ++  K++   +   + S     FKF+ + +Y 
Sbjct: 107 EDLMYEWKKPVGSDVFIYDAEMAQFTVVNVKRKLKHPLYHSRRFSGMTVTFKFQRRTMYY 166

Query: 449 IYRNYI 432
           I++ YI
Sbjct: 167 IFQMYI 172


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,930,282
Number of Sequences: 59808
Number of extensions: 432385
Number of successful extensions: 976
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)