Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0945
         (803 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    25   0.82 
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    25   0.82 
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    25   0.82 
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    25   0.82 
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    25   0.82 
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    25   0.82 
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    25   0.82 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   1.9  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   7.7  

>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 227 RRERRRQSYLELPRLRSVDDTQNESC 304
           + ER  Q Y E  + RS D T+ E C
Sbjct: 51  KNEREYQKYRETSKERSRDRTERERC 76


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 227 RRERRRQSYLELPRLRSVDDTQNESC 304
           + ER  Q Y E  + RS D T+ E C
Sbjct: 51  KNEREYQKYRETSKERSRDRTERERC 76


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 227 RRERRRQSYLELPRLRSVDDTQNESC 304
           + ER  Q Y E  + RS D T+ E C
Sbjct: 51  KNEREYQKYRETSKERSRDRTERERC 76


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 227 RRERRRQSYLELPRLRSVDDTQNESC 304
           + ER  Q Y E  + RS D T+ E C
Sbjct: 51  KNEREYQKYRETSKERSRDRTERERC 76


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 227 RRERRRQSYLELPRLRSVDDTQNESC 304
           + ER  Q Y E  + RS D T+ E C
Sbjct: 51  KNEREYQKYRETSKERSRDRTERERC 76


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 227 RRERRRQSYLELPRLRSVDDTQNESC 304
           + ER  Q Y E  + RS D T+ E C
Sbjct: 51  KNEREYQKYRETSKERSRDRTERERC 76


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 227 RRERRRQSYLELPRLRSVDDTQNESC 304
           + ER  Q Y E  + RS D T+ E C
Sbjct: 51  KNEREYQKYRETSKERSRDRTERERC 76


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 582 LFLYNFFFRISANHLL 535
           L LY  +FRIS  HLL
Sbjct: 23  LILYFIYFRISRRHLL 38


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 624 LMYFY*TDLDFVLSINDILPQLASCLIIVSS 716
           L+Y Y  + D+   +N+ L  L+ CL   S+
Sbjct: 291 LLYVYAQESDYYPDLNEWLYILSGCLYYFST 321


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,149
Number of Sequences: 438
Number of extensions: 4919
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)