Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0941
         (635 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0092 + 722744-723459,723542-723711,723792-724885                 29   3.1  
06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,376...    28   5.4  
06_01_0484 + 3439365-3439474,3439574-3439699,3439700-3439851,344...    28   5.4  
04_04_0201 - 23555336-23556008,23556097-23556258,23556353-235572...    28   7.1  
04_04_0964 - 29749624-29749649,29749742-29749945,29750036-297506...    27   9.4  
03_02_0091 + 5574528-5577254                                           27   9.4  

>01_01_0092 + 722744-723459,723542-723711,723792-724885
          Length = 659

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 193 VSITDDQFTFPWVNLSPFSLFAPLWKLIPTFVDIGPRIY 309
           +S  + +F     NL   S   PLW  +P F D+G ++Y
Sbjct: 92  ISYNESRFWVVDANLDNSSCPLPLWNNLPYFNDMGTKLY 130


>06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,
            3764013-3764961,3766967-3767064,3768144-3768284,
            3768758-3768874,3768924-3769013,3769014-3771818
          Length = 1632

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +3

Query: 216  HVPMGEPFAI-QSVCSFVEADPHFCGHRAKN 305
            HVPM EP  I  S C  V AD    G   KN
Sbjct: 1336 HVPMQEPLRIASSCCEIVNADQVCAGEVGKN 1366


>06_01_0484 +
           3439365-3439474,3439574-3439699,3439700-3439851,
           3440129-3440238,3440872-3440957,3441463-3441573,
           3441679-3441799
          Length = 271

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 309 VDSWPDVHKSGDQLPQRSKQTEWRKVHPWERELVICNGDGLRDN 178
           VD+  + H +G  +P  +    W  VH  E  L I +G   RDN
Sbjct: 196 VDAEMNCHVTGSLIPPHTGSMLWLSVHDDEYALEINSGKRSRDN 239


>04_04_0201 -
           23555336-23556008,23556097-23556258,23556353-23557206,
           23557452-23557613,23558197-23558649,23559729-23559788,
           23559983-23560058,23561546-23561593,23561948-23562022,
           23562067-23562494
          Length = 996

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +1

Query: 463 TYSLPVNSSAADVTAELTSDGYLVVTAPISENVDKTKNTERVVPIVETGAPYKKDE 630
           T S+ V+  AA      + +G + VT+ +S+ VD+      V+P+    A  + DE
Sbjct: 659 TASMQVHEGAAAAQLGESPEG-VDVTSAVSDEVDRDDKATHVLPLAAAAADGESDE 713


>04_04_0964 -
           29749624-29749649,29749742-29749945,29750036-29750634,
           29750742-29750826,29750914-29751562,29751568-29751643,
           29753891-29753957,29754097-29754998,29756579-29756790
          Length = 939

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 433 HDVFASQFFHTYSLPVNSSAADVTAELTSD 522
           HD F   + H  S+P+    A V AE++ D
Sbjct: 809 HDSFLRSYLHLTSMPLPCEGAAVPAEISKD 838


>03_02_0091 + 5574528-5577254
          Length = 908

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 522 WIPRRDGADQRKCG*NEKYRARCTYC 599
           W+ R DGA++R      +Y+ RC  C
Sbjct: 70  WLSRVDGAEKRVAKLRREYQRRCCSC 95


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,438,211
Number of Sequences: 37544
Number of extensions: 238229
Number of successful extensions: 758
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)