Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0940
         (806 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g45390.1 68416.m04900 lectin protein kinase family protein co...    29   4.8  
At5g59260.1 68418.m07426 lectin protein kinase, putative similar...    28   8.4  

>At3g45390.1 68416.m04900 lectin protein kinase family protein
           contains Protein kinases ATP-binding region signature,
           Prosite:PS00107 and Legume lectins beta-chain signature,
           Prosite:PS00307
          Length = 604

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = -3

Query: 705 WNKEIYITNYSYSILYKAIKMYKKAIRL 622
           W KE     YSY  LYKA K + K  RL
Sbjct: 330 WEKEYGPLRYSYESLYKATKGFNKDGRL 357


>At5g59260.1 68418.m07426 lectin protein kinase, putative similar to
           receptor lectin kinase 3 [Arabidopsis thaliana]
           gi|4100060|gb|AAD00733; contains protein kinase domain,
           Pfam:PF00069; contains legume lectins alpha and beta
           domains, Pfam:PF00138 and Pfam:PF00139
          Length = 674

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 708 KWNKEIYITNYSYSILYKAIKMYKK 634
           +W KE     YS+ ILYKA K +++
Sbjct: 333 QWEKEYSPQRYSFRILYKATKGFRE 357


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,595,092
Number of Sequences: 28952
Number of extensions: 276639
Number of successful extensions: 442
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1833827200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)