Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0939
(677 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 23 3.0
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 23 3.0
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 3.0
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 22 4.0
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 21 7.0
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 7.0
AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock prote... 21 7.0
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 21 7.0
AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2 prot... 21 9.3
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 9.3
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 9.3
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 22.6 bits (46), Expect = 3.0
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -2
Query: 343 LSICCSRRDWSIAC*AERC 287
L++C + R WS+ C C
Sbjct: 348 LAVCVNERPWSLYCGEPPC 366
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 140 APHNMPQAPEPADSS 184
APH P AP P+ SS
Sbjct: 71 APHGPPYAPHPSLSS 85
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 22.6 bits (46), Expect = 3.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 251 PVGLDPGRPACDTPLRSACNRPVTP*TTNGQRHAG 355
P G P ++ ++ +R TP +TNG R G
Sbjct: 922 PAETHAGSPCRNSASPASSDRSGTPRSTNGDRKPG 956
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 22.2 bits (45), Expect = 4.0
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +1
Query: 79 RANGRSPRDAYPRATRYCNPGTAQYAPSTRTRR 177
R + R PR R PG Q AP+ +R
Sbjct: 198 RYSDRPSSGRSPRTRRVKKPGAKQGAPTAEEKR 230
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 79 RANGRSPRDAYPRATRYCNPGTAQYAPSTR 168
R + SPR + P +T+ +PG Y + R
Sbjct: 64 RKSPSSPRISSPSSTKSGSPGFLTYTKADR 93
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.4 bits (43), Expect = 7.0
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +3
Query: 24 HQLAARRPSRCRCHGNRLKSKREVPARCVSTCNALLQ 134
H + R P H + LKSK+E + +LQ
Sbjct: 404 HLNSNRAPLGLHFHASWLKSKKEFKEELIKFIEEMLQ 440
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.4 bits (43), Expect = 7.0
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +3
Query: 24 HQLAARRPSRCRCHGNRLKSKREVPARCVSTCNALLQ 134
H + R P H + LKSK+E + +LQ
Sbjct: 411 HLNSNRAPLGLHFHASWLKSKKEFKEELIKFIEEMLQ 447
>AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock protein
70 protein.
Length = 195
Score = 21.4 bits (43), Expect = 7.0
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +2
Query: 236 GADESPVGLDPGRPACDTPLRSACNRPVTP*TTNGQRHAGSENYREHI 379
GA+++ + D G D + + N T+G H G E++ + +
Sbjct: 17 GAEQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGEDFDQKV 64
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 21.4 bits (43), Expect = 7.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 513 MQPRSVRSVDSMLEGGKRVKRCACK 587
M +S ++DS L+ G +V+ CK
Sbjct: 503 MLVKSFDAIDSKLQTGGKVETSICK 527
>AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2
protein.
Length = 377
Score = 21.0 bits (42), Expect = 9.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 538 SIRCWRAGNA*SAVLANVPRVCSRL 612
SI W AGNA A +A P + + L
Sbjct: 101 SIGGWNAGNAILAPIAASPELRANL 125
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -3
Query: 237 PGHRPAPSGPQVVPFLE*ELSAGSGAW 157
P P P+G P L E+S + +W
Sbjct: 162 PPMYPFPAGQYPYPILSPEMSQVAASW 188
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -3
Query: 237 PGHRPAPSGPQVVPFLE*ELSAGSGAW 157
P P P+G P L E+S + +W
Sbjct: 54 PPMYPFPAGQYPYPILSPEMSQVAASW 80
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,108
Number of Sequences: 336
Number of extensions: 3752
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -