Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0939
(677 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_1051 - 10806183-10806540,10807973-10808043 31 0.85
09_02_0236 - 6131072-6131639,6132047-6132180 31 1.1
08_02_1204 - 25267546-25268219,25268319-25268452,25269567-252696... 31 1.1
01_06_0778 - 31920956-31921502,31921639-31921771,31922287-319223... 31 1.1
05_07_0294 - 29038259-29038420,29038526-29038632,29038889-290390... 30 1.5
08_01_0014 + 102100-102455,102543-102900 30 2.0
02_05_0818 + 32004749-32005347,32005905-32006415,32006539-32007300 29 2.6
06_03_0789 + 24630552-24631171,24631240-24631279,24632422-246324... 29 3.4
04_03_0649 - 18402976-18403220,18403305-18404499 29 3.4
02_05_0073 - 25602268-25603182,25603273-25604190 29 3.4
02_03_0388 + 18429538-18430598,18430971-18431081,18431165-184312... 29 3.4
01_06_0181 - 27262425-27263337,27263452-27263633 29 3.4
03_05_0334 - 23250967-23251224,23251796-23252126,23252204-23252673 29 4.5
02_05_0807 + 31870018-31870953 29 4.5
02_01_0615 - 4604373-4604537,4604618-4604707,4604871-4604989,460... 29 4.5
01_01_1195 - 9567023-9567789,9567871-9568120 29 4.5
04_04_0258 + 23988409-23989580,23990450-23990851,23991138-23991204 28 6.0
02_05_1337 - 35780076-35780290,35780377-35780408,35780490-357805... 28 6.0
11_04_0291 - 15851647-15852252,15853995-15854136,15854666-158548... 28 7.9
09_06_0184 - 21413275-21414267 28 7.9
07_03_0944 + 22787933-22789906 28 7.9
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 28 7.9
04_04_1603 - 34716753-34717097,34717512-34717659,34717747-347179... 28 7.9
04_01_0070 - 706640-706747,707221-707307,707397-707502,707585-70... 28 7.9
02_02_0707 + 13144147-13144788,13145115-13148663 28 7.9
02_02_0193 + 7649488-7649556,7651372-7651833,7652117-7652145,765... 28 7.9
>12_01_1051 - 10806183-10806540,10807973-10808043
Length = 142
Score = 31.1 bits (67), Expect = 0.85
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -3
Query: 321 VTG-RLHAERSGVSHAGRPGSSPTGDSSAPGHRPAPSGPQVVPFLE*ELSAGSGAWG 154
VTG RL A R V AG+ G + G+++ + A + P +L +G G WG
Sbjct: 18 VTGMRLRASRVVVVVAGKVGGAVLGEAAVEDNVGAGGDGKSAPAAAADLGSGGGGWG 74
>09_02_0236 - 6131072-6131639,6132047-6132180
Length = 233
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 3 SLH*DRWHQLAARRPSRCRCHGNRLKSKREVPARCVSTCNALLQSRHRTICPK 161
+LH R H AR P+ CR RL+ R P+ +LL+S + PK
Sbjct: 27 ALHCCRHHAPVARDPAHCRLDEGRLRPSR-APSPSTPESQSLLESDTKETMPK 78
>08_02_1204 -
25267546-25268219,25268319-25268452,25269567-25269661,
25270289-25270304,25270635-25270684,25270960-25271331
Length = 446
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +2
Query: 17 PMAPVSRQASFPLPMPWESSEEQTGGPREMRIHVQRVIAIPAPHNMP 157
P+AP + S+ P PW S GG R + + +++ H P
Sbjct: 356 PVAPSAMAGSYMAPSPWTGSRGHEGGGRSVAHQLPHEVSLDEVHPGP 402
>01_06_0778 -
31920956-31921502,31921639-31921771,31922287-31922374,
31922857-31923198
Length = 369
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Frame = -3
Query: 273 RPGSSPTGDSSAPGHRPAPSGPQVVPFLE*ELS-------AGSGAWGILCGAGIA-ITRC 118
R SS + SS P RPA + +V P + ELS AG W L +A I RC
Sbjct: 6 RSSSSSSAPSSRPARRPARTNARVSPDVSSELSPLAGEEGAGEERWSALVPDLLADILRC 65
Query: 117 TWIRISRGPP 88
R PP
Sbjct: 66 VEAGSERWPP 75
>05_07_0294 -
29038259-29038420,29038526-29038632,29038889-29039093,
29039173-29039536,29039588-29039772,29039879-29040080,
29040697-29041589
Length = 705
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 237 PGHRPAPSGPQVVPFLE*ELSAGSGAWGILCGAG 136
PGHR + SGP + F SAGSG G CG G
Sbjct: 101 PGHRRSGSGPLI--FSGGSSSAGSGGGGGGCGGG 132
>08_01_0014 + 102100-102455,102543-102900
Length = 237
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Frame = -3
Query: 318 TGRLHAERSGVSHAGRPGSSPTGDSSAP------GHRPAPSGPQVVPFLE*ELSAGSGAW 157
+G +H + G H S + AP GHR A SG VPFL S GSG
Sbjct: 7 SGSVHVDEHGHGHGKASSSYDGAGAPAPAPAPFQGHRKAGSGSSDVPFL--LRSGGSGGD 64
Query: 156 GI 151
G+
Sbjct: 65 GL 66
>02_05_0818 + 32004749-32005347,32005905-32006415,32006539-32007300
Length = 623
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 551 GGRETREALCLQMCLESALDYITSARDRTA 640
GGR L+ LES L+++T+ARDR A
Sbjct: 44 GGRWAPPDQVLENVLESVLEFLTAARDRNA 73
>06_03_0789 +
24630552-24631171,24631240-24631279,24632422-24632486,
24632615-24632660,24633222-24633314,24633736-24633855,
24633931-24633982,24634051-24634123,24634350-24634416,
24634670-24634720,24635026-24635118,24635207-24635308
Length = 473
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 204 PEGQKVQDGAPVQMSLPWGLTP 269
P G+ + G P Q+ PWG+TP
Sbjct: 416 PAGRLIVTGEPEQLDNPWGVTP 437
>04_03_0649 - 18402976-18403220,18403305-18404499
Length = 479
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 86 TGGPREMRIHVQRVIAI--PAPHNMPQAPEPADSSYSR 193
TGG R+ + VQR A+ PAP P + SS+SR
Sbjct: 416 TGGARQTQAPVQRPPALQSPAPTTAPMSSSSTTSSFSR 453
>02_05_0073 - 25602268-25603182,25603273-25604190
Length = 610
Score = 29.1 bits (62), Expect = 3.4
Identities = 41/179 (22%), Positives = 66/179 (36%), Gaps = 8/179 (4%)
Frame = +2
Query: 50 PLPMPWESSEEQTGGPREMRIHVQRVIAIPAPHNMPQAPEPADSSYSRNGTT*GPEGAGR 229
P P P S GG R +R +++++PA +AP PA +S R + A
Sbjct: 197 PAPAPAGSGGGGGGGERVVRQQPGKMVSVPA-REKARAPSPAAASGKRCASPRSSSPARM 255
Query: 230 CPGADESPVGLDPGRPACDTPLRSAC---NRPVTP*TTNGQRHAGSENYREHIXXXXXXX 400
+E+ G + RS+ P+ N R+ N+ + I
Sbjct: 256 VAAGNENAGGGQMTAAQTPSLSRSSSPYRRSPMAEIDENSLRNNNGANHHKKISENALAI 315
Query: 401 XXXXXXXTRGTARR-----DPTSSAHAPSASGTTRH*REATLYAASLSSQRRFDAGGRE 562
T + + + A AP AS TT R A+ A SL+++ R R+
Sbjct: 316 AAAPQKATERSKEKPKVVEETVLVAAAPPASKTTAT-RTASATAESLNTKARSRRASRD 373
>02_03_0388 +
18429538-18430598,18430971-18431081,18431165-18431237,
18431513-18431695
Length = 475
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 321 VTGRLHAERSGVSHAGRPGSSPTGDSSAPGHRPAPSGPQ 205
+ GR A R+ A P S P + +P H PAPS PQ
Sbjct: 65 IPGRQAASRAPSPPA--PPSPPQASAPSPPHAPAPSPPQ 101
>01_06_0181 - 27262425-27263337,27263452-27263633
Length = 364
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 132 QSRHRTICPKHPN-PQTAPTQEMEQPEGQKVQDGAPVQMSLPWGL 263
Q RHR + P P T+P+ P+ Q+ D P + S+ W L
Sbjct: 198 QRRHRVVPSSPPEEPNTSPSPAAAPPDQQEGGDDDPDRGSISWWL 242
>03_05_0334 - 23250967-23251224,23251796-23252126,23252204-23252673
Length = 352
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 117 TWIRISRGPPVCSSDDSHGIGSGKDAWRLT 28
T+IR++ PP S D + G+G KDA LT
Sbjct: 199 TFIRLNHYPPCPSPDLALGVGRHKDAGALT 228
>02_05_0807 + 31870018-31870953
Length = 311
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 327 HGVTGRLHAERSGVSHAGRPGSSPTGDSSAPGHRPAPSGPQVVP 196
HG + R A R G P + G + P H+P GPQ P
Sbjct: 168 HGASPRSRAGRFAYVWVGNPATQCPGQCAWPYHQPV-YGPQAAP 210
>02_01_0615 -
4604373-4604537,4604618-4604707,4604871-4604989,
4605132-4605234,4605318-4605414,4605512-4605575,
4605673-4605805,4605899-4606143,4606263-4606439,
4607110-4607419
Length = 500
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -3
Query: 276 GRPGSSPTGDSS---APGHRPAPSGPQVVPFLE*ELSAGSGAWG 154
GR SP +S PG PAP+ P+VVP + G G G
Sbjct: 34 GRTHRSPAAAASPSPGPGPSPAPATPRVVPPAPAPATGGGGGGG 77
>01_01_1195 - 9567023-9567789,9567871-9568120
Length = 338
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 327 HGVTGRLHAERSGVSHAGRPGSSPTGDSSAPGHRPAP 217
H + R H E+SG +P SS + AP P P
Sbjct: 143 HVLMARRHREQSGAFRRRKPSSSSASPAPAPAPPPPP 179
>04_04_0258 + 23988409-23989580,23990450-23990851,23991138-23991204
Length = 546
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 303 AERSGVSHAGRPGSSPTGDSSAPGHRPAP-SGPQVVPF 193
+ R +H+ RPG SP SA G AP S P+V PF
Sbjct: 324 SSRPNSAHSSRPG-SPGSQVSAVGSEGAPRSRPKVNPF 360
>02_05_1337 -
35780076-35780290,35780377-35780408,35780490-35780584,
35780670-35780743,35780851-35780986,35781072-35781135,
35781333-35781395,35781514-35781656,35781752-35781889,
35781973-35782094,35782210-35782375,35782647-35782652,
35782988-35783059,35783241-35783348,35783719-35783848,
35783964-35784070,35784896-35785005,35785302-35785435,
35785528-35785982,35786068-35786595
Length = 965
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 5 APLGPMAPVSRQASFPLPMPWESSEEQTGGPREMRIHVQRVIAIPAPHNMPQA 163
A P+AP RQA P P E ++ P+E + A PH++P +
Sbjct: 89 ASSSPLAPELRQAIMEAPRPSELAQPSPTPPQEQPVDA----ATTTPHHIPSS 137
>11_04_0291 -
15851647-15852252,15853995-15854136,15854666-15854881,
15854957-15855052,15855147-15855259,15856516-15856727,
15856842-15856939,15857066-15857186,15857291-15857508,
15857657-15857837,15857919-15858207,15858303-15858367,
15858480-15858591
Length = 822
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 563 TREALCLQMCLESALDYITSARDRTAGPPSPIY 661
T A + C + ALDY+ S + GP IY
Sbjct: 261 TTAASAIHSCNDRALDYLVSLTSKLGGPVPAIY 293
>09_06_0184 - 21413275-21414267
Length = 330
Score = 27.9 bits (59), Expect = 7.9
Identities = 27/88 (30%), Positives = 34/88 (38%)
Frame = +2
Query: 2 FAPLGPMAPVSRQASFPLPMPWESSEEQTGGPREMRIHVQRVIAIPAPHNMPQAPEPADS 181
F P P P S +++FP P P + T P + P P P PAD+
Sbjct: 78 FLP-APALPTSMESTFPSPRPPSTPSSST--PPSSPVP-------PPSARSPTVPAPADA 127
Query: 182 SYSRNGTT*GPEGAGRCPGADESPVGLD 265
G G E AG G DE+ G D
Sbjct: 128 DDDDQGGGSGQE-AGGGNGEDEAGGGDD 154
>07_03_0944 + 22787933-22789906
Length = 657
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 6/55 (10%)
Frame = -3
Query: 375 CSR*FSLPACRCPFVVHGVTGRLHAERSGVSHA------GRPGSSPTGDSSAPGH 229
CSR +S CPFV G R R A RPG P+GDS H
Sbjct: 245 CSRAYSHDWTECPFVHPGENARRRDPRKHPYTAVPCPNFRRPGGCPSGDSCEFSH 299
>07_03_0471 +
18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -2
Query: 283 ACRSAGVKPHGRLICTGAPSCTFWPSGCSIS*VGAVCGFGCLGHIVRCRDCNNALHVDTH 104
ACR G+ + PSC W C+ G G + H+VR + LH D+
Sbjct: 163 ACRYCGIHNPACVARCNVPSCRKW--FCNSR--GNTSGSHIVNHLVRAKHKEVCLHKDSP 218
Query: 103 LAGT 92
L T
Sbjct: 219 LGET 222
>04_04_1603 -
34716753-34717097,34717512-34717659,34717747-34717984,
34718075-34718285,34718398-34718513,34718698-34718793,
34719279-34719306
Length = 393
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 130 NNALHVDTHLAGTSRLLFRRFPWHRQ 53
+N H+ T +AGT+ L + WH Q
Sbjct: 217 DNITHISTRVAGTTGYLAPEYAWHGQ 242
>04_01_0070 -
706640-706747,707221-707307,707397-707502,707585-707693,
707766-708145,708508-708601,709351-709475,709633-709674,
710822-710892,710979-711060,711157-711277,712404-712713
Length = 544
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +2
Query: 38 QASFPLPMPWESSEEQTGGPREMRIHVQRVIAIPAPHNMPQAPEPADSSYSRNGTT*GPE 217
Q S P P +E+T P+E I + + H DS +G++ GP+
Sbjct: 363 QPSVPQPTDTAVPDEKTQSPKEQSIDIDIPEPLLDEHINQDGNSSLDSKGDEDGSSIGPK 422
Query: 218 G--AGRCPGAD 244
AG+ P +
Sbjct: 423 SLKAGKAPSPE 433
>02_02_0707 + 13144147-13144788,13145115-13148663
Length = 1396
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 528 LSEAAYNVASRQCRVVPEAEGACAELVGSR 439
LSE Y++ + R +PE C+E+ SR
Sbjct: 682 LSELYYSICRNEIRTIPEQGAGCSEMSFSR 711
>02_02_0193 +
7649488-7649556,7651372-7651833,7652117-7652145,
7653284-7653391,7653544-7653708,7653882-7653987,
7654105-7654731
Length = 521
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 26 PVSRQASFPLPMPWESSEEQTGGPREMRIHVQRVIAIPAPHNMPQAPEPADSS 184
P+ P+P+PW S +E+T + I V R A AP + + P +S
Sbjct: 317 PMDGDMDDPIPIPWVSEDEKTASTKPEFIPVNRNSA-EAPCSSCSSSMPPSNS 368
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,266,955
Number of Sequences: 37544
Number of extensions: 510321
Number of successful extensions: 2266
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2259
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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