Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0939
(677 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31319| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_20844| Best HMM Match : Ion_trans (HMM E-Value=0) 30 1.5
SB_41405| Best HMM Match : RVT_1 (HMM E-Value=0) 30 2.0
SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40) 30 2.0
SB_32040| Best HMM Match : zf-CCHC (HMM E-Value=0.01) 30 2.0
SB_8534| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 30 2.0
SB_58196| Best HMM Match : 7tm_1 (HMM E-Value=6.7e-10) 29 2.6
SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_46883| Best HMM Match : zf-CCHC (HMM E-Value=0.01) 29 2.6
SB_37588| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_8751| Best HMM Match : zf-CCHC (HMM E-Value=0.01) 29 2.6
SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38) 29 2.6
SB_57360| Best HMM Match : Peptidase_A17 (HMM E-Value=8.9e-29) 29 3.5
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_40529| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_23091| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_18823| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_710| Best HMM Match : rve (HMM E-Value=0.003) 29 4.6
SB_54679| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_27573| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_57101| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 28 6.0
SB_39472| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22) 28 8.0
SB_3674| Best HMM Match : Retrotrans_gag (HMM E-Value=1.7e-06) 28 8.0
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_810| Best HMM Match : TAF4 (HMM E-Value=4.7e-31) 28 8.0
>SB_31319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1186
Score = 30.3 bits (65), Expect = 1.5
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = -2
Query: 262 KPHGRLICTGAPSCTFWPSGCSIS*VGAVCGFGCLGHIVRC-RDCNNALHVDTHLAGTSR 86
KPH C T W G S + CG+G +V C R +AL D+ SR
Sbjct: 731 KPHTTRRCNPGGCKTHWFIGSSFTSCSVTCGYGVKERLVFCGRQGGDAL-PDSQC--ESR 787
Query: 85 LLFRRFPWHRQREGRLAANWCHRS*WSE 2
+R R RE R A+W S WS+
Sbjct: 788 --YRPRSTQRCREKRCQASWV-TSEWSK 812
>SB_20844| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 2675
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -2
Query: 280 CRSAGVKPHGRLICTGAPSCTFWPSGCSIS*VGAVCGFGCLGHIVRC 140
C G KP G +CT C W +G + S CG G +V C
Sbjct: 323 CTGVGAKPSGTRLCTLTRYCPVWATG-AWSTCYPKCGRGISTRMVYC 368
>SB_41405| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2639
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 333 VVHGVTGRLHAERSGVSHAGRPGSSPTGDSSAPGHRPA 220
V++GVTG L S + PT D S P HRPA
Sbjct: 53 VINGVTGALAKTIPSSSPSKIAAYEPTPDPSRPPHRPA 90
>SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40)
Length = 1740
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 102 RCVST--CNALLQSRHRTICPKHPNPQTAPTQEMEQPEGQKVQDGAP 236
RC +T CN + +H T+ P + P +E+ G+ +G P
Sbjct: 484 RCHTTTFCNCKSERKHHTLLHNPPRAEDDPPKELNSSAGEGTTEGPP 530
>SB_32040| Best HMM Match : zf-CCHC (HMM E-Value=0.01)
Length = 471
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 102 RCVST--CNALLQSRHRTICPKHPNPQTAPTQEMEQPEGQKVQDGAP 236
RC +T CN + +H T+ P + P +E+ G+ + +G P
Sbjct: 320 RCHTTTFCNCKSERKHHTLLHNPPRAKDDPPKELNSSAGEGMTEGPP 366
>SB_8534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 926
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 8 PLGPMAPVSRQASFPLPMPWESSEEQTGGPREMR 109
PLG + P FP P+P +S+ GGP +MR
Sbjct: 819 PLGIINPQQDVYQFPTPLP-QSNHYHQGGPHQMR 851
>SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1244
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 102 RCVST--CNALLQSRHRTICPKHPNPQTAPTQEMEQPEGQKVQDGAP 236
RC +T CN + +H T+ P + P +E+ G+ + +G P
Sbjct: 278 RCHTTTFCNCKSERKHHTLLHNPPRAKDDPPKELNSSAGEGMTEGPP 324
>SB_58196| Best HMM Match : 7tm_1 (HMM E-Value=6.7e-10)
Length = 334
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -3
Query: 606 RADSRHICKHSASRVSRPPASNRRCELSEAAYNVASRQ 493
RA R +CK++ +R +P A N C++S A + +RQ
Sbjct: 295 RAFKRLVCKYARNRSVQPIALNVVCDVSLPAITLGTRQ 332
>SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 102 RCVST--CNALLQSRHRTICPKHPNPQTAPTQEMEQPEGQKVQDGAP 236
RC +T CN + +H T+ P + P +E+ G+ +G P
Sbjct: 4 RCHTTTFCNCKSERKHHTLLHNPPRAKDDPPKELNSSAGEGTTEGPP 50
>SB_46883| Best HMM Match : zf-CCHC (HMM E-Value=0.01)
Length = 370
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 102 RCVST--CNALLQSRHRTICPKHPNPQTAPTQEMEQPEGQKVQDGAP 236
RC +T CN + +H T+ P + P +E+ G+ +G P
Sbjct: 95 RCHTTTFCNCKSERKHHTLLHNPPRAKDDPPKELNSSAGEGTTEGPP 141
>SB_37588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 80 EQTGGPREMRIHVQRVIAIPAPHNMPQAPEPA 175
+Q + H Q +++P PH PQ P PA
Sbjct: 73 QQQAALAAQQAHSQPAVSLPQPHPSPQMPSPA 104
>SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 29.5 bits (63), Expect = 2.6
Identities = 29/150 (19%), Positives = 47/150 (31%)
Frame = +3
Query: 72 RLKSKREVPARCVSTCNALLQSRHRTICPKHPNPQTAPTQEMEQPEGQKVQDGAPVQMSL 251
R ++ P+ ST + Q+ P P P + P Q+ Q Q G P Q+
Sbjct: 1046 RARASHMSPSTPTSTVHNAPQAHAVPQQPGTPQPASQPQQKPSPTIQQPPQQGQPAQLQQ 1105
Query: 252 PWGLTPADLHAIHRSAQHAIDQSRREQQMDNDMQEVKTIVNTLXXXXXXXXXXXXXXXXX 431
P + Q + + +R+Q MQ+ +
Sbjct: 1106 QQLQKPQQQSQPQIAQQQQLHEMQRQQIQQQQMQQQQQQQQQQQIQQQQQQMQQQQLQQQ 1165
Query: 432 XXXXTPRAQRTLLLPQEQHDIDERPHYMQP 521
P Q +PQ+Q + P QP
Sbjct: 1166 MQQQQPPQQMPQNMPQQQQPATQLPSQGQP 1195
>SB_8751| Best HMM Match : zf-CCHC (HMM E-Value=0.01)
Length = 637
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 102 RCVST--CNALLQSRHRTICPKHPNPQTAPTQEMEQPEGQKVQDGAP 236
RC +T CN + +H T+ P + P +E+ G+ +G P
Sbjct: 389 RCHTTTFCNCKSERKHHTLLHNPPRAKDDPPKELNSSAGEGTTEGPP 435
>SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38)
Length = 450
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 80 EQTGGPREMRIHVQRVIAIPAPHNMPQAPEPA 175
+Q + H Q +++P PH PQ P PA
Sbjct: 122 QQQAALAAQQAHSQPAVSLPQPHPSPQMPSPA 153
>SB_57360| Best HMM Match : Peptidase_A17 (HMM E-Value=8.9e-29)
Length = 1354
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Frame = +2
Query: 137 PAPHNMPQAPEPADSSYSRNGTT*GPE---GAGRCP----GADESPVGLDPGRPACDTPL 295
P H+ Q +P S +N + GAG+ P G +GL P R +C TP+
Sbjct: 956 PRAHDTDQPSDPCQRSADQNPYPTQRDFQAGAGKRPCSDTGCHRHSMGLSPSRKSCSTPV 1015
Query: 296 RS----ACNRPVTP*TTNGQRHAGSE 361
+ + +TP T ++H +
Sbjct: 1016 PATPVESTASDITPLLTQLEKHVAED 1041
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 29.1 bits (62), Expect = 3.5
Identities = 29/95 (30%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Frame = +2
Query: 26 PVSRQASFPLPMPWESSEEQTGGPREMRIHVQRVIAIPAPHNMPQAP--EPADSSYSRNG 199
P SRQ+ P+P P S Q P R H Q I P PH P P +P +
Sbjct: 981 PASRQSKAPIPHP--SPPMQPAKP--PRQHTQCSID-PVPHLKPPGPTEQPVPPKRKASP 1035
Query: 200 TT*GPEGAGRCPGADESPVGLDPGRPACDTPLRSA 304
+ P R P S V + P R P A
Sbjct: 1036 PSAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPA 1070
>SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1515
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 102 RCVST--CNALLQSRHRTICPKHPNPQTAPTQEMEQPEGQKVQDGAP 236
RC +T CN + +H T+ P + P +E+ G+ +G P
Sbjct: 556 RCHTTTFCNCKSERKHHTLFHNPPRAKDDPPKELNSSAGEGTTEGPP 602
>SB_40529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1437
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 333 VVHGVTGRLHAERSGVSHAGRPGSSPTGDSSAPGHRPA 220
V++GVTG L + + PT D S P HRPA
Sbjct: 354 VINGVTGALAKTIPSSNPSKIAAYEPTPDPSRPPHRPA 391
>SB_23091| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 333 VVHGVTGRLHAERSGVSHAGRPGSSPTGDSSAPGHRP 223
V++GVTG L + + PT D+S P HRP
Sbjct: 148 VINGVTGALAKTIPSSNPSKIAAYEPTPDTSRPSHRP 184
>SB_18823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 33 AARRPSRCRCHGNRLKSKREVPARC 107
+A+R RC G++ K +R PARC
Sbjct: 26 SAKRVGHARCDGSKSKDERVGPARC 50
>SB_710| Best HMM Match : rve (HMM E-Value=0.003)
Length = 538
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 33 AARRPSRCRCHGNRLKSKREVPARC 107
+A+R RC G++ K +R PARC
Sbjct: 491 SAKRVGHARCDGSKSKDERVGPARC 515
>SB_54679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 491
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = -3
Query: 171 GSGAWGILCGAGIAITRCTWIRISRGPPVCSSDDSHGIGSGKDAW 37
G W + A A+ I IS G + D HG G + AW
Sbjct: 22 GGRGWVVCAAAFFAMFTVFGIHISYGVIYANLVDEHGFGEAESAW 66
>SB_27573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 238 TGAPSCTFWPSGCSIS*VGAVCGFGCLG 155
T CT+ I+ VG VC FGC+G
Sbjct: 229 TKTRKCTYTHPDMQITAVGTVCVFGCVG 256
>SB_57101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 855
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -3
Query: 333 VVHGVTGRLHAERSGVSHAGRPGSSPTGDSSAPGHRP 223
V++GVTG L S + PT D S P HRP
Sbjct: 134 VINGVTGALAKTIPSSSPSKIAAYEPTPDPSRPPHRP 170
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -3
Query: 324 GVTGRLHAERSGVSHA---GRPGSSPTGDSSAPGHRPAPSGP 208
G T +++ G S + G G GD S+P HR +PS P
Sbjct: 935 GTTSGVYSMGGGPSDSDDNGDRGDDGDGDGSSPSHRSSPSTP 976
>SB_39472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +3
Query: 123 ALLQSRHRTICPKHPNPQTAPTQEMEQPEGQKVQDGAPVQMSLPWGLTPAD 275
+L Q + + PK P Q+ +P GQ+ Q + P G P D
Sbjct: 64 SLTQQANNPLTPKGKQPNQPTDQQPNKPTGQQPNQPTGQQPNQPTGQQPKD 114
>SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22)
Length = 820
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = -3
Query: 333 VVHGVTGRLHAERSGVSHAGRPGSSPTGDSSAPGHRPAPSGPQVVPFLE*ELSAGSGAWG 154
++HG L A R + SSP G+SS+PG P+ P L+A S G
Sbjct: 663 LLHGSLNSLMASRESLVK-----SSPPGNSSSPGIPPSGPANSFPPVTPTSLTANSSPSG 717
Query: 153 I 151
I
Sbjct: 718 I 718
>SB_3674| Best HMM Match : Retrotrans_gag (HMM E-Value=1.7e-06)
Length = 882
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 333 VVHGVTGRLHAERSGVSHAGRPGSSPTGDSSAPGHRP 223
V++GVTG L + + PT D S P HRP
Sbjct: 252 VINGVTGALAKTIPSSNPSKIAAYEPTPDPSRPSHRP 288
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 264 SSPTGDSSAPGHRPAPSGPQ 205
S PT PGHRP P G Q
Sbjct: 1366 SRPTAPLPTPGHRPEPHGAQ 1385
>SB_810| Best HMM Match : TAF4 (HMM E-Value=4.7e-31)
Length = 883
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/47 (27%), Positives = 18/47 (38%)
Frame = +3
Query: 162 HPNPQTAPTQEMEQPEGQKVQDGAPVQMSLPWGLTPADLHAIHRSAQ 302
HP Q P + + +G +Q LTPA +HR Q
Sbjct: 455 HPQTQVTPQKPTQTQQGTPIQQKVAASQPNIVKLTPAQQQLLHRQRQ 501
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,083,355
Number of Sequences: 59808
Number of extensions: 511885
Number of successful extensions: 1939
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1933
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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