Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0939
(677 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 29 0.10
AY578802-1|AAT07307.1| 108|Anopheles gambiae FK506-binding prot... 27 0.72
AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein. 26 1.3
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 25 2.9
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 24 3.8
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 24 3.8
AY193730-1|AAO62003.1| 441|Anopheles gambiae cytochrome P450 CY... 24 5.1
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 24 5.1
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 24 5.1
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 23 6.7
AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein. 23 8.9
AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein. 23 8.9
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 23 8.9
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 29.5 bits (63), Expect = 0.10
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +3
Query: 168 NPQTAPTQEMEQPEGQKVQDGAPVQ-MSLPWGLTPADLHAIHRSAQHAIDQSRREQQMDN 344
N TA Q+ P+G+ A Q + LP + +HRS Q Q +++QQ
Sbjct: 1256 NQLTAQHQDPRGPQGRSTDYHATQQPLPLPGLASEMQPQQLHRSQQQQQQQQQQQQQQQQ 1315
Query: 345 DMQE 356
Q+
Sbjct: 1316 QQQQ 1319
>AY578802-1|AAT07307.1| 108|Anopheles gambiae FK506-binding protein
protein.
Length = 108
Score = 26.6 bits (56), Expect = 0.72
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 541 IRCWRAGNA*SAVLANVPRVCSRLYNIGSRSHSG 642
IR W G A +V VCS Y GSR H G
Sbjct: 57 IRGWDEGVAQMSVGQRAKLVCSPDYAYGSRGHPG 90
>AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein.
Length = 525
Score = 25.8 bits (54), Expect = 1.3
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Frame = +2
Query: 89 GGPREMRIHVQRVIA---IPAPHNMPQAPEPADSSYSRNGTT*GPEGAGRCPGADESPVG 259
GG R +H R + P+ MP + P S+ + TT P GA PG + P
Sbjct: 385 GGGRYPLMHEIRSLVNGGTPSTTTMPPSVAPTTSTVAPGTTTTTPTGAN--PGTTQPPTS 442
Query: 260 LDPGRPACDT 289
P T
Sbjct: 443 DAPNHTTTST 452
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 24.6 bits (51), Expect = 2.9
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = -3
Query: 609 SRADSRHICKHSASRVSRPPASNRRCELSEAAYNVASRQCRVVP 478
+ A R C+ + RP A C +Y+VA R++P
Sbjct: 799 AEATDRQWCQRMLASFQRPLAQRVVCGFRSISYSVAVLMPRLIP 842
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 24.2 bits (50), Expect = 3.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 321 VTGRLHAERSGVSHAGRPGSSPTGDSSAPGHRP 223
V GRL A+ S ++ P +P + + PG P
Sbjct: 360 VIGRLPADNSSALNSPNPARAPPRNFTMPGPGP 392
Score = 23.4 bits (48), Expect = 6.7
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +3
Query: 156 PKHPNPQTAPTQEMEQPEGQ--KVQDGAPVQMSLP 254
P PNP P +M +P G + G P Q P
Sbjct: 178 PARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPP 212
Score = 23.4 bits (48), Expect = 6.7
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +3
Query: 42 RPSRCRCHGNRLKSKREVPARCVSTCNALLQSRHRTICPKHPNPQTAPTQEMEQP 206
RP+ + LKS ++P N +SR R+ + N +T P +QP
Sbjct: 586 RPNALASPASPLKSPSKIPGLARRPENISSESRSRSTSKQRANAKT-PETPSDQP 639
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 24.2 bits (50), Expect = 3.8
Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Frame = -3
Query: 297 RSGVSHAGRPGSS-PTGDSSAPGHRPAPSGP 208
R H G G+S P G APG P P
Sbjct: 56 RGLTGHRGEKGNSGPVGPPGAPGRDGMPGAP 86
>AY193730-1|AAO62003.1| 441|Anopheles gambiae cytochrome P450
CYPm3r10 protein.
Length = 441
Score = 23.8 bits (49), Expect = 5.1
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 276 LHAIHRSAQHAIDQSRREQQMDNDMQEVK 362
+HAIHR +H D R + QE K
Sbjct: 340 VHAIHRDPEHFPDPERFDPDRFTAEQEAK 368
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 23.8 bits (49), Expect = 5.1
Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Frame = -2
Query: 334 CCSRRDWS-IAC*AERCIACRSAGVKPHGRLICTGAPSCTFWPSGCSIS*VGAVCGFGCL 158
C R W+ AC C A + P G +C+G +C C+++ G G C
Sbjct: 616 CECREGWTGPAC---DCRASNETCMPPGGGELCSGHGTCECGTCRCTVTEDGRYTGRYCE 672
Query: 157 GHIVRCRDCNNALH 116
CN H
Sbjct: 673 KCPTCAGRCNEFKH 686
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 23.8 bits (49), Expect = 5.1
Identities = 11/34 (32%), Positives = 12/34 (35%)
Frame = -2
Query: 304 C*AERCIACRSAGVKPHGRLICTGAPSCTFWPSG 203
C +R C G K H C P C P G
Sbjct: 445 CGPDRRDCCLRGGEKGHFAATCRLPPRCVLCPDG 478
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 23.4 bits (48), Expect = 6.7
Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = -2
Query: 334 CCSRRDWSIAC*A--ERCIACRSAGVKPHGRLICTGAPSC 221
C W+ C + +R C GV H +CT P C
Sbjct: 665 CLELGHWAHDCRSPDDRQNMCIRCGVVGHMAKVCTSQPKC 704
Score = 23.0 bits (47), Expect = 8.9
Identities = 13/62 (20%), Positives = 23/62 (37%)
Frame = +3
Query: 171 PQTAPTQEMEQPEGQKVQDGAPVQMSLPWGLTPADLHAIHRSAQHAIDQSRREQQMDNDM 350
PQ ++ +Q Q+ Q Q P L + QH Q +++QQ
Sbjct: 267 PQLRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQ 326
Query: 351 QE 356
++
Sbjct: 327 RQ 328
>AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein.
Length = 259
Score = 23.0 bits (47), Expect = 8.9
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -2
Query: 289 CIACRSAGVKPHGRLICTGAPSCTFWPSGC 200
C+ C++ G K H C P T P C
Sbjct: 191 CMRCKATGTKAHTAKYCPLKPVIT--PEDC 218
>AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein.
Length = 260
Score = 23.0 bits (47), Expect = 8.9
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -2
Query: 289 CIACRSAGVKPHGRLICTGAPSCTFWPSGC 200
C+ C++ G K H C P T P C
Sbjct: 192 CMRCKATGTKAHTAKYCPLKPVIT--PEDC 219
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 23.0 bits (47), Expect = 8.9
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 195 MEQPEGQKVQDGAPVQMSLPWGLTPADLHAIHRSAQHAIDQSRREQQMD 341
+E P G ++ A + L G TPA + A A+D+ RE ++
Sbjct: 661 VELPPGAELIGYADDLVLLAPGTTPAAAAVVAEEAVSAVDRWLREHHLE 709
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,107
Number of Sequences: 2352
Number of extensions: 17256
Number of successful extensions: 52
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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