BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0939
(677 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-1144|AAF54526.2| 897|Drosophila melanogaster CG6312-PA... 32 0.63
BT001332-1|AAN71087.1| 886|Drosophila melanogaster AT18855p pro... 30 2.5
AY118833-1|AAM50693.1| 489|Drosophila melanogaster GM01981p pro... 30 2.5
AE014297-980|AAF54409.1| 874|Drosophila melanogaster CG8273-PA ... 30 2.5
BT023891-1|ABA81825.1| 505|Drosophila melanogaster LP23312p pro... 30 3.3
AY119071-1|AAM50931.1| 374|Drosophila melanogaster LP08751p pro... 30 3.3
AL121806-11|CAB58086.1| 505|Drosophila melanogaster EG:BACR42I1... 30 3.3
AJ133103-1|CAB63452.1| 897|Drosophila melanogaster RFX transcri... 30 3.3
AE014298-163|AAF45595.1| 505|Drosophila melanogaster CG11382-PB... 30 3.3
AE014134-105|AAF51496.1| 549|Drosophila melanogaster CG13691-PA... 29 4.4
BT003322-1|AAO25082.1| 575|Drosophila melanogaster AT02511p pro... 29 5.8
AF195494-1|AAG28466.1| 1106|Drosophila melanogaster Misexpressio... 29 5.8
AE013599-2504|AAF57837.2| 2171|Drosophila melanogaster CG4903-PA... 29 5.8
AE013599-2343|AAS64829.1| 575|Drosophila melanogaster CG15920-P... 29 5.8
AE013599-2342|AAF57953.1| 620|Drosophila melanogaster CG15920-P... 29 5.8
AE013599-2235|AAF58027.2| 1630|Drosophila melanogaster CG33017-P... 29 5.8
BT014662-1|AAT27286.1| 153|Drosophila melanogaster GM17393p pro... 29 7.7
AE014297-740|AAF54226.1| 139|Drosophila melanogaster CG7443-PA ... 29 7.7
>AE014297-1144|AAF54526.2| 897|Drosophila melanogaster CG6312-PA
protein.
Length = 897
Score = 32.3 bits (70), Expect = 0.63
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 74 SEEQTGGPREMRIHVQRVIAIPAPHNMPQAPEPADSSYSRNGTT*GPEGAGRCPGADESP 253
S+ Q+ G R+ + V I + PQ P +++S +G + G G G P +D+S
Sbjct: 302 SQSQSHG-RDSPHSLTEVAYIQEAQSTPQTPTSTTTTHSASGGSLGTGGGGASPDSDQSA 360
Query: 254 VG 259
+G
Sbjct: 361 LG 362
>BT001332-1|AAN71087.1| 886|Drosophila melanogaster AT18855p
protein.
Length = 886
Score = 30.3 bits (65), Expect = 2.5
Identities = 22/55 (40%), Positives = 24/55 (43%)
Frame = +2
Query: 155 PQAPEPADSSYSRNGTT*GPEGAGRCPGADESPVGLDPGRPACDTPLRSACNRPV 319
PQ PA + RN GP GAG CP G PG P TPL + PV
Sbjct: 767 PQMRAPA--AQRRNKNMAGPIGAGPCPAVQ----GAGPG-PLASTPLVTQDKHPV 814
>AY118833-1|AAM50693.1| 489|Drosophila melanogaster GM01981p
protein.
Length = 489
Score = 30.3 bits (65), Expect = 2.5
Identities = 22/55 (40%), Positives = 24/55 (43%)
Frame = +2
Query: 155 PQAPEPADSSYSRNGTT*GPEGAGRCPGADESPVGLDPGRPACDTPLRSACNRPV 319
PQ PA + RN GP GAG CP G PG P TPL + PV
Sbjct: 370 PQMRAPA--AQRRNKNMAGPIGAGPCPAVQ----GAGPG-PVAPTPLVTQDKHPV 417
>AE014297-980|AAF54409.1| 874|Drosophila melanogaster CG8273-PA
protein.
Length = 874
Score = 30.3 bits (65), Expect = 2.5
Identities = 22/55 (40%), Positives = 24/55 (43%)
Frame = +2
Query: 155 PQAPEPADSSYSRNGTT*GPEGAGRCPGADESPVGLDPGRPACDTPLRSACNRPV 319
PQ PA + RN GP GAG CP G PG P TPL + PV
Sbjct: 755 PQMRAPA--AQRRNKNMAGPIGAGPCPAVQ----GAGPG-PLASTPLVTQDKHPV 802
>BT023891-1|ABA81825.1| 505|Drosophila melanogaster LP23312p
protein.
Length = 505
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 300 ERSGVSHAGRPGSSPTGDSSAPGHRPAPSG 211
E SG SH R + G SAP HRP+ G
Sbjct: 212 EYSGHSHGARGSTHGIGYGSAPAHRPSYGG 241
>AY119071-1|AAM50931.1| 374|Drosophila melanogaster LP08751p
protein.
Length = 374
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 300 ERSGVSHAGRPGSSPTGDSSAPGHRPAPSG 211
E SG SH R + G SAP HRP+ G
Sbjct: 81 EYSGHSHGARGSTHGIGYGSAPAHRPSYGG 110
>AL121806-11|CAB58086.1| 505|Drosophila melanogaster
EG:BACR42I17.10 protein.
Length = 505
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 300 ERSGVSHAGRPGSSPTGDSSAPGHRPAPSG 211
E SG SH R + G SAP HRP+ G
Sbjct: 212 EYSGHSHGARGSTHGIGYGSAPAHRPSYGG 241
>AJ133103-1|CAB63452.1| 897|Drosophila melanogaster RFX
transcription factor protein.
Length = 897
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 74 SEEQTGGPREMRIHVQRVIAIPAPHNMPQAPEPADSSYSRNGTT*GPEGAGRCPGADES 250
S+ Q+ G R+ + V I + PQ P +++S +G + G G G P +D+S
Sbjct: 302 SQSQSHG-RDSPHSLTEVAYIQEAQSTPQTPTSTTTTHSASGGSLGTGGGGASPDSDQS 359
>AE014298-163|AAF45595.1| 505|Drosophila melanogaster CG11382-PB
protein.
Length = 505
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 300 ERSGVSHAGRPGSSPTGDSSAPGHRPAPSG 211
E SG SH R + G SAP HRP+ G
Sbjct: 212 EYSGHSHGARGSTHGIGYGSAPAHRPSYGG 241
>AE014134-105|AAF51496.1| 549|Drosophila melanogaster CG13691-PA
protein.
Length = 549
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 333 VVHGVTGRLHAERSGVSHAGRPGSSPTGDSSAPGHR 226
V H GRL++ R G + RPG+S + S+ G R
Sbjct: 175 VAHSSDGRLNSSRPGSAAVARPGTSLSRPGSSLGSR 210
>BT003322-1|AAO25082.1| 575|Drosophila melanogaster AT02511p
protein.
Length = 575
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 303 AERSGVSHAGRPGSSPTGDSSAPGHRPAPS-GP 208
A SG + GRP SS S PG RP+ S GP
Sbjct: 285 APGSGNGNGGRPSSSYGAPGSGPGGRPSDSYGP 317
>AF195494-1|AAG28466.1| 1106|Drosophila melanogaster Misexpression
suppressor of ras 4 protein.
Length = 1106
Score = 29.1 bits (62), Expect = 5.8
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +2
Query: 8 PLGPMAPVSRQASFPLPMPWESSEEQTGGPREMRIHVQRVIAIPAPHNMPQAPEPAD 178
P P PVS++A P+P E+ EQ P+++ H+Q I P P APEP +
Sbjct: 724 PPEPPLPVSQEA-VEQPVPVEAIPEQL--PQQL--HLQSDIQNPFPAENIPAPEPVE 775
>AE013599-2504|AAF57837.2| 2171|Drosophila melanogaster CG4903-PA
protein.
Length = 2171
Score = 29.1 bits (62), Expect = 5.8
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +2
Query: 8 PLGPMAPVSRQASFPLPMPWESSEEQTGGPREMRIHVQRVIAIPAPHNMPQAPEPAD 178
P P PVS++A P+P E+ EQ P+++ H+Q I P P APEP +
Sbjct: 725 PPEPPLPVSQEA-VEQPVPVEAIPEQL--PQQL--HLQSDIQNPFPAENIPAPEPVE 776
>AE013599-2343|AAS64829.1| 575|Drosophila melanogaster CG15920-PB,
isoform B protein.
Length = 575
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 303 AERSGVSHAGRPGSSPTGDSSAPGHRPAPS-GP 208
A SG + GRP SS S PG RP+ S GP
Sbjct: 285 APGSGNGNGGRPSSSYGAPGSGPGGRPSDSYGP 317
>AE013599-2342|AAF57953.1| 620|Drosophila melanogaster CG15920-PA,
isoform A protein.
Length = 620
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 303 AERSGVSHAGRPGSSPTGDSSAPGHRPAPS-GP 208
A SG + GRP SS S PG RP+ S GP
Sbjct: 285 APGSGNGNGGRPSSSYGAPGSGPGGRPSDSYGP 317
>AE013599-2235|AAF58027.2| 1630|Drosophila melanogaster CG33017-PB
protein.
Length = 1630
Score = 29.1 bits (62), Expect = 5.8
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +3
Query: 69 NRLKSKREVPARCVSTCNALLQSRHRTICPK---HPNPQTAPTQEMEQPEGQKVQDGAPV 239
NRL+ ++E + V+T S + I K P Q+ T + Q K+Q G PV
Sbjct: 1303 NRLREQKEGKTKLVTTSENQSSSAKKNIRAKTGISPRVQSRSTSPVRQTGATKIQPGEPV 1362
Query: 240 Q 242
+
Sbjct: 1363 K 1363
>BT014662-1|AAT27286.1| 153|Drosophila melanogaster GM17393p
protein.
Length = 153
Score = 28.7 bits (61), Expect = 7.7
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Frame = +2
Query: 194 NGTT*GPEGAGRCPG----ADESPVGLDPGRPACDTPLRSACNRPVT 322
NG+T P+ G PG A +P G P PA P A + P T
Sbjct: 81 NGSTVAPQAGGAAPGSSPGAPATPPGSTPAVPATVAPETPAPSAPAT 127
>AE014297-740|AAF54226.1| 139|Drosophila melanogaster CG7443-PA
protein.
Length = 139
Score = 28.7 bits (61), Expect = 7.7
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Frame = +2
Query: 194 NGTT*GPEGAGRCPG----ADESPVGLDPGRPACDTPLRSACNRPVT 322
NG+T P+ G PG A +P G P PA P A + P T
Sbjct: 67 NGSTVAPQAGGAAPGSSPGAPATPPGSTPAVPATVAPETPAPSAPAT 113
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,591,068
Number of Sequences: 53049
Number of extensions: 814350
Number of successful extensions: 4436
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4421
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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