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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0939
         (677 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g07600.1 68418.m00871 oleosin / glycine-rich protein                31   0.93 
At5g05190.1 68418.m00553 expressed protein similar to unknown pr...    31   0.93 
At5g21160.1 68418.m02528 La domain-containing protein / proline-...    30   1.2  
At1g07360.1 68414.m00785 zinc finger (CCCH-type) family protein ...    30   1.2  
At4g09040.1 68417.m01491 RNA recognition motif (RRM)-containing ...    30   1.6  
At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7)                29   2.1  
At3g10300.3 68416.m01236 calcium-binding EF hand family protein ...    29   2.1  
At3g10300.2 68416.m01235 calcium-binding EF hand family protein ...    29   2.1  
At3g10300.1 68416.m01234 calcium-binding EF hand family protein ...    29   2.1  
At1g20910.1 68414.m02618 ARID/BRIGHT DNA-binding domain-containi...    29   2.1  
At1g20900.1 68414.m02617 DNA-binding protein-related contains Pf...    29   2.1  
At1g76510.2 68414.m08903 ARID/BRIGHT DNA-binding domain-containi...    29   2.8  
At1g76510.1 68414.m08902 ARID/BRIGHT DNA-binding domain-containi...    29   2.8  
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro...    28   4.9  
At3g27473.1 68416.m03434 DC1 domain-containing protein contains ...    28   4.9  
At1g65180.1 68414.m07390 DC1 domain-containing protein contains ...    28   4.9  
At4g10190.1 68417.m01670 F-box family protein-related contains T...    28   6.5  
At2g20300.1 68415.m02371 protein kinase family protein contains ...    28   6.5  
At5g51840.1 68418.m06427 expressed protein                             27   8.6  
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro...    27   8.6  
At4g00900.1 68417.m00122 calcium-transporting ATPase 2, endoplas...    27   8.6  
At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) simi...    27   8.6  
At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3) ...    27   8.6  

>At5g07600.1 68418.m00871 oleosin / glycine-rich protein 
          Length = 230

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 27/92 (29%), Positives = 35/92 (38%)
 Frame = -3

Query: 276 GRPGSSPTGDSSAPGHRPAPSGPQVVPFLE*ELSAGSGAWGILCGAGIAITRCTWIRISR 97
           GR  +   GD S  G     S P+         +AG+GA     GAG A           
Sbjct: 146 GRSFTGKFGDQSGGGSTAGGSTPE---------AAGAGAGAAAAGAGAAAAAGAAAAAVP 196

Query: 96  GPPVCSSDDSHGIGSGKDAWRLTGAIGPSGAK 1
           G    S+    G G+G  A   TG  G +G+K
Sbjct: 197 GLGAASAGAGPGAGAGTPAPAPTGKAGKAGSK 228


>At5g05190.1 68418.m00553 expressed protein similar to unknown
           protein (emb|CAB88044.1)
          Length = 615

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +3

Query: 75  LKSKREVPARCVSTCNALLQSRHRTICPKHPNPQTAPTQEMEQPEGQKVQDGAPVQMS 248
           L+   +VP      C+A+LQ++ R I P    P    T+  +  E Q V +   V  S
Sbjct: 21  LQEDEDVPVYQCGGCSAILQAKRRNIAPS-STPSAGETERAQANEPQSVPETNNVSSS 77


>At5g21160.1 68418.m02528 La domain-containing protein /
           proline-rich family protein contains proline-rich
           extensin domains, INTERPRO:IPR002965, PF05383: La domain
          Length = 826

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -3

Query: 339 PFVVHGVTGRLHAERSGVSHAGRPGSSPTGDSSAPGHRPAPSGPQVVPFL 190
           P     VTG+  ++  G ++ G    +P+G  S PG R   +GP   P+L
Sbjct: 80  PIPTPAVTGQAKSKGGGKANPGH--KNPSGRHSKPGPRSNQNGPPPPPYL 127


>At1g07360.1 68414.m00785 zinc finger (CCCH-type) family protein /
           RNA recognition motif (RRM)-containing protein similar
           to SP|O59800 Cell cycle control protein cwf5
           {Schizosaccharomyces pombe}, RNA Binding Protein 47
           [Nicotiana plumbaginifolia] GI:9663769; contains Pfam
           profile: PF00076 RNA recognition motif (aka RRM, RBD, or
           RNP domain)
          Length = 481

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -3

Query: 306 HAERSGVSH-AGRPGSSPTGDSSAPGHRPAPSGPQVVPFLE*ELSAGSGA 160
           H + S + H A  P + P      PG RPAPS   V         AGSGA
Sbjct: 413 HHQPSPMQHYAPPPAAYPYPQQPGPGSRPAPSPTAVSAISPDSAPAGSGA 462


>At4g09040.1 68417.m01491 RNA recognition motif (RRM)-containing
           protein low similarity to enhancer binding protein-1;
           EBP1 [Entamoeba histolytica] GI:8163877, SP|P19682 28
           kDa ribonucleoprotein, chloroplast precursor (28RNP)
           {Nicotiana sylvestris}; contains InterPro entry
           IPR000504: RNA-binding region RNP-1 (RNA recognition
           motif) (RRM)
          Length = 304

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 21/97 (21%), Positives = 39/97 (40%)
 Frame = +3

Query: 24  HQLAARRPSRCRCHGNRLKSKREVPARCVSTCNALLQSRHRTICPKHPNPQTAPTQEMEQ 203
           H L+   PS CR H         +PA+  +  +    +    +     +  +AP  E+ +
Sbjct: 32  HSLSLSTPSLCRLH-RHATFPDSIPAKSRNLTSYFSTTTQEPVLESSSSSSSAP--EVVE 88

Query: 204 PEGQKVQDGAPVQMSLPWGLTPADLHAIHRSAQHAID 314
            E  K +    +  ++PW  TP D+ ++       ID
Sbjct: 89  EEISKTR---LIAQNVPWTSTPEDIRSLFEKYGSVID 122


>At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7)
          Length = 130

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +2

Query: 137 PAPHNMPQAPEPADSSYSRNGTT*GPEGAGRCPGADESPVGLDPGRP 277
           PAP + P +  P+ SS +   +   PEG G  PG + +P   D   P
Sbjct: 58  PAPTSSPPSSAPSPSSDAPTASPPAPEGPGVSPG-ELAPTPSDASAP 103


>At3g10300.3 68416.m01236 calcium-binding EF hand family protein low
           similarity to SP|P12815 Programmed cell death protein 6
           (Probable calcium-binding protein ALG-2) {Mus musculus};
           contains INTERPRO:IPR002048 calcium-binding EF-hand
           domain
          Length = 335

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/87 (26%), Positives = 32/87 (36%)
 Frame = +2

Query: 17  PMAPVSRQASFPLPMPWESSEEQTGGPREMRIHVQRVIAIPAPHNMPQAPEPADSSYSRN 196
           P  P    AS P  +P+ +     G P           ++P  HN P   +P  +SY   
Sbjct: 41  PPPPYGSSASSPYAVPYGAQPAPYGAPPSAPY-----ASLPGDHNKPHKEKPHGASYG-- 93

Query: 197 GTT*GPEGAGRCPGADESPVGLDPGRP 277
             +  P G G  P +  S  G   G P
Sbjct: 94  --SPSPGGYGAHPSSGPSDYGGYGGAP 118


>At3g10300.2 68416.m01235 calcium-binding EF hand family protein low
           similarity to SP|P12815 Programmed cell death protein 6
           (Probable calcium-binding protein ALG-2) {Mus musculus};
           contains INTERPRO:IPR002048 calcium-binding EF-hand
           domain
          Length = 324

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/87 (26%), Positives = 32/87 (36%)
 Frame = +2

Query: 17  PMAPVSRQASFPLPMPWESSEEQTGGPREMRIHVQRVIAIPAPHNMPQAPEPADSSYSRN 196
           P  P    AS P  +P+ +     G P           ++P  HN P   +P  +SY   
Sbjct: 41  PPPPYGSSASSPYAVPYGAQPAPYGAPPSAPY-----ASLPGDHNKPHKEKPHGASYG-- 93

Query: 197 GTT*GPEGAGRCPGADESPVGLDPGRP 277
             +  P G G  P +  S  G   G P
Sbjct: 94  --SPSPGGYGAHPSSGPSDYGGYGGAP 118


>At3g10300.1 68416.m01234 calcium-binding EF hand family protein low
           similarity to SP|P12815 Programmed cell death protein 6
           (Probable calcium-binding protein ALG-2) {Mus musculus};
           contains INTERPRO:IPR002048 calcium-binding EF-hand
           domain
          Length = 232

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/87 (26%), Positives = 32/87 (36%)
 Frame = +2

Query: 17  PMAPVSRQASFPLPMPWESSEEQTGGPREMRIHVQRVIAIPAPHNMPQAPEPADSSYSRN 196
           P  P    AS P  +P+ +     G P           ++P  HN P   +P  +SY   
Sbjct: 41  PPPPYGSSASSPYAVPYGAQPAPYGAPPSAPY-----ASLPGDHNKPHKEKPHGASYG-- 93

Query: 197 GTT*GPEGAGRCPGADESPVGLDPGRP 277
             +  P G G  P +  S  G   G P
Sbjct: 94  --SPSPGGYGAHPSSGPSDYGGYGGAP 118


>At1g20910.1 68414.m02618 ARID/BRIGHT DNA-binding domain-containing
           protein low similarity to Chain A, Human Mrf-2 Domain
           [Homo sapiens] GI:14278238; contains Pfam profile
           PF01388: ARID/BRIGHT DNA binding domain
          Length = 398

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 204 PEGQKVQDGAPVQMSLPWGLTP 269
           P G+ V  G P Q+  PWG+TP
Sbjct: 343 PAGKVVITGQPEQLDNPWGITP 364


>At1g20900.1 68414.m02617 DNA-binding protein-related contains Pfam
           domain PF03479: Domain of unknown function (DUF296),
           found in AT-hook motifs Pfam:PF02178
          Length = 311

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = -3

Query: 276 GRPGSSPTGDSSAPGHRPAPSGP 208
           GRP S P   SSAPG RP    P
Sbjct: 71  GRPDSDPNTSSSAPGKRPRGRPP 93


>At1g76510.2 68414.m08903 ARID/BRIGHT DNA-binding domain-containing
           protein contains Pfam profile PF01388: ARID/BRIGHT DNA
           binding domain
          Length = 434

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 204 PEGQKVQDGAPVQMSLPWGLTP 269
           P G+ V  G P Q+  PWG+TP
Sbjct: 379 PAGRLVIAGQPEQLDNPWGITP 400


>At1g76510.1 68414.m08902 ARID/BRIGHT DNA-binding domain-containing
           protein contains Pfam profile PF01388: ARID/BRIGHT DNA
           binding domain
          Length = 434

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 204 PEGQKVQDGAPVQMSLPWGLTP 269
           P G+ V  G P Q+  PWG+TP
Sbjct: 379 PAGRLVIAGQPEQLDNPWGITP 400


>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
           protein contains similarity to SP|Q02917 Early nodulin
           55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
           domain
          Length = 370

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +3

Query: 141 HRTICPKHPNPQTAPTQEMEQPEGQKVQDGAPVQMSLP 254
           H    PK P+P ++P Q    P     Q  +PV    P
Sbjct: 271 HSPATPKSPSPSSSPAQSPATPSPMTPQSPSPVSSPSP 308


>At3g27473.1 68416.m03434 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 662

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 20/64 (31%), Positives = 26/64 (40%)
 Frame = -2

Query: 250 RLICTGAPSCTFWPSGCSIS*VGAVCGFGCLGHIVRCRDCNNALHVDTHLAGTSRLLFRR 71
           +L+ TGAP  T   S C +      CG      +  C DC   L +D  + G   L    
Sbjct: 68  KLLTTGAPVHT--DSKCHL------CGKNTKHLLYHCYDCKVNLDIDCMIDGICTLARLS 119

Query: 70  FPWH 59
            PWH
Sbjct: 120 KPWH 123


>At1g65180.1 68414.m07390 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 653

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 175 CGFGCLGHIVRCRDCNNALHVDTHLAG 95
           CG G  G+  +C +C+ A HVD    G
Sbjct: 142 CGKGGSGYPYKCHECDLAFHVDCEKYG 168


>At4g10190.1 68417.m01670 F-box family protein-related contains
           TIGRFAM TIGR01640: F-box protein interaction domain
          Length = 353

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 261 LTPADLHAIHRSAQHAIDQSRREQQMDNDMQEV 359
           L   DLH IH +  + I Q R +  + N ++EV
Sbjct: 55  LVSVDLHTIHNNKVNIISQLRLKDPLSNFLEEV 87


>At2g20300.1 68415.m02371 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 744

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -3

Query: 300 ERSGVSHAGRPGSSPTGD--SSAPGHRPAP 217
           E + +S+ G P SSP GD    APG  P P
Sbjct: 212 EVTHISYPGIPSSSPNGDVTGDAPGGLPIP 241


>At5g51840.1 68418.m06427 expressed protein
          Length = 245

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 111 STCNALLQSRHRTICPKHPNPQTAPTQEMEQPEGQKVQDGAP 236
           +T  A L+   R +   +PN  +   Q++++PE + V D AP
Sbjct: 132 NTQYARLEELKRRLEALNPNRSSTSIQQVQEPETKSVVDSAP 173


>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
           protein similar to PIR|JC7196 phytocyanin-related
           protein Pn14 {Ipomoea nil}; contains Pfam profile
           PF02298: Plastocyanin-like domain
          Length = 349

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
 Frame = -3

Query: 282 HAGRPGSSPTGDSSAPG--HRPAPSGP 208
           HA  PGSS  G  + PG  H P  S P
Sbjct: 141 HAAAPGSSTPGSMTPPGGAHSPKSSSP 167


>At4g00900.1 68417.m00122 calcium-transporting ATPase 2, endoplasmic
           reticulum-type (ECA2) nearly identical to SP|O23087
           Calcium-transporting ATPase 2, endoplasmic
           reticulum-type (EC 3.6.3.8) {Arabidopsis thaliana};
           contains InterPro Accession IPR006069: Cation
           transporting ATPase
          Length = 1054

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 331 CSRRDWSIAC*AERCIACRSAGVKPHGRLI-CTGAPS 224
           C+  D ++   AE C  C  AGV   G+L   TG P+
Sbjct: 415 CNNMDANLQAVAEICSICNDAGVFYEGKLFRATGLPT 451


>At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) similar
           to CREB-binding protein GB:AAC51770 GI:2443859 from
           [Homo sapiens]; contains Pfam PF02135: TAZ zinc finger
           profile; contains Pfam PF00569: Zinc finger, ZZ type
           domain; identical to histone acetyltransferase HAC4
           (GI:14794966) {Arabidopsis thaliana}
          Length = 1456

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 586 NVPRVCSRLYNIGSRSHSGPSVSNL 660
           N+P+V  +L N GSR H G    NL
Sbjct: 353 NLPQVSQQLSNHGSRQHRGQHSQNL 377


>At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3)
           identical to papain-like cysteine peptidase XBCP3
           GI:14600257 from [Arabidopsis thaliana]; contains Pfam
           profiles PF00112: Papain family cysteine protease and
           PF00396: Granulin
          Length = 437

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
 Frame = -2

Query: 364 VFTSCMSLSICCSRRDWSIAC*AERCIACRSAGVKPHGRLICT-GAPSCTFWPSGC 200
           +FT C S   CC  R+    C + +C    SA     GR  C    P C    S C
Sbjct: 352 LFTYCSSGETCCCARELFGLCFSWKCCEIESAVCCKDGRHCCPHDYPVCDTTRSLC 407


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,739,054
Number of Sequences: 28952
Number of extensions: 328123
Number of successful extensions: 1243
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1240
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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