Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0938
         (849 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    32   0.005
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    24   1.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   4.0  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   7.0  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   7.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 32.3 bits (70), Expect = 0.005
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
 Frame = -3

Query: 844 Y*LLLLHHRQSFNIVTNIYKNILQV*NYYKVFLAFYC----FNVKLQLCAYYIY 695
           Y L  +++    +I  N++   L    Y+ V L FYC    F V   LC YY Y
Sbjct: 51  YNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFY 104



 Score = 25.0 bits (52), Expect = 0.76
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -1

Query: 741 FIVLMLSYS--YVLIIFMTHNI*VSNIFYSII*LQLINMLQNFY 616
           FI+L+  Y   Y  IIF  H + +  I+Y ++ L  +  +  FY
Sbjct: 107 FIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFY 150


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 491 KNEIVVIKYYGKTYSNCTSNTICN 562
           K  IV I +YG+T++   SNT  N
Sbjct: 260 KKLIVGIPFYGRTFTLSNSNTNYN 283


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -1

Query: 363  SILLLYLGYSNIFAISS--SDGGSFLLILNQDSHSAGIGFWKS 241
            +I +LY+GY  I  I +    G  FL+++     + G+  W S
Sbjct: 877  NISMLYIGYQIILMIGTVIGPGTIFLMLVGAFVAAFGLDQWSS 919


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -1

Query: 363  SILLLYLGYSNIFAISS--SDGGSFLLILNQDSHSAGIGFWKS 241
            +I +LY+GY  I  I +    G  FL+++     + G+  W S
Sbjct: 877  NISMLYIGYQIILMIGTVIGPGTIFLMLVGAFVAAFGLDQWSS 919


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +2

Query: 515 YYGKTYSNCTSNTICNDV*SCLFS 586
           ++G+TY+N +S + C +   C+ +
Sbjct: 28  FFGRTYNNISSISECKNNGECVIN 51


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +2

Query: 86  VFRNFINSLRPKQVTG 133
           + ++ +NS++PK+V G
Sbjct: 319 IVQSLVNSMKPKEVPG 334


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 283 ENEKKRTTIRRGNSKNVAIAQIKKEN 360
           E++K+R  +R     N  IAQI   N
Sbjct: 302 ESKKRRELLRLAQQVNANIAQITAAN 327


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,600
Number of Sequences: 336
Number of extensions: 3954
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)