Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0938
         (849 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0225 - 26555217-26555280,26555647-26555713,26555800-265558...    33   0.38 
02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216     30   2.0  
07_03_0873 + 22194172-22195434,22195534-22195670,22197531-221976...    30   2.7  
01_01_0207 - 1773790-1774215,1775428-1775888,1776177-1776455,177...    29   4.7  
03_03_0248 + 15819264-15819460,15820691-15820729,15820797-158209...    29   6.2  
03_02_0560 + 9462996-9463454                                           29   6.2  

>05_06_0225 -
           26555217-26555280,26555647-26555713,26555800-26555871,
           26557058-26557109,26557250-26557302,26557476-26557535,
           26557718-26558075
          Length = 241

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 215 RWYDPPKGQDFQNPIPAEWESWLRMRRKEPPSEEEIA 325
           RW +       Q  +  EW  WL  +RK+ P+ EE+A
Sbjct: 124 RWVEFKGSDQDQTTVQVEWICWLNGQRKKAPTPEELA 160


>02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216
          Length = 1030

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 22/66 (33%), Positives = 34/66 (51%)
 Frame = +1

Query: 238 SGFPKSNTSRMGVLVENEKKRTTIRRGNSKNVAIAQIKKENAAKIEMKRLAEGGSLPAVP 417
           S  P++  SR+   VE+ K  +T+R  +S     A + KE  A+  ++R   GG   A P
Sbjct: 62  SSIPRA--SRIPSSVESSKLVSTLR-ASSVMPGRASVGKEMEAEAGLRRSVSGGIRAAAP 118

Query: 418 ERGPQS 435
           ER  +S
Sbjct: 119 ERARRS 124


>07_03_0873 +
           22194172-22195434,22195534-22195670,22197531-22197639,
           22197739-22197865,22197952-22198012,22199332-22199722
          Length = 695

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 179 PASPSEGKR-KPSRWYDPPKGQDFQNPIPAEWESWLRMRRKEPPSEEE 319
           P+ P+ G+R K +   DPP   D +   PA+     R    +PP E++
Sbjct: 212 PSPPTRGRRRKRAATSDPPPEDDEEEGTPAQPRRRKRAATSDPPPEDD 259


>01_01_0207 -
           1773790-1774215,1775428-1775888,1776177-1776455,
           1776601-1776724,1776811-1777020
          Length = 499

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +3

Query: 51  CLMENIDKYGALFLEISLIHLDQ 119
           CL+E++ K+G  F+ +S IH+ +
Sbjct: 439 CLVEDVKKFGVEFISVSFIHVSR 461


>03_03_0248 +
           15819264-15819460,15820691-15820729,15820797-15820936,
           15821150-15821225,15822866-15823160,15823236-15823342,
           15823442-15823489,15823568-15823853,15823954-15823961,
           15824083-15824184,15824426-15824553,15824664-15824741,
           15825047-15825145,15825247-15825302
          Length = 552

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
 Frame = +1

Query: 283 ENEKKRTTIRRGNSKNVAIAQIKKENAAKIEMKRLAEGG-SLPAVPERGP----QSYPTY 447
           E EK++  I +G+     +++ ++   ++IE +R  E   S+  V  R P    +  P+Y
Sbjct: 234 EEEKRQKEIIKGDPSIKKLSRRERRKVSQIEREREREAARSVGRVSYRDPYREQRRSPSY 293

Query: 448 DEYSTG 465
           D YS G
Sbjct: 294 DSYSRG 299


>03_02_0560 + 9462996-9463454
          Length = 152

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +1

Query: 349 KKENAAKIEMKRLAEGGSLPAVPERGPQSYPTYDEYSTGDSEGVHSNKK*NCSYKI-LWK 525
           KK  A + +    A  G  P   +R P S  +  E   GD +G    KK   +YKI ++K
Sbjct: 12  KKPAAGEEKSAEKAPAGKKPKAEKRLPASKASSKEGGAGDKKGRKKAKKSVETYKIYIFK 71

Query: 526 NLFKLH 543
            L ++H
Sbjct: 72  VLKQVH 77


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,268,063
Number of Sequences: 37544
Number of extensions: 386329
Number of successful extensions: 952
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)