Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0938
(849 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11942| Best HMM Match : Ank (HMM E-Value=3.6e-22) 48 1e-05
SB_6553| Best HMM Match : Complex1_17_2kD (HMM E-Value=2.50006e-41) 30 2.7
SB_31104| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_54640| Best HMM Match : TolA (HMM E-Value=1.7) 29 4.8
SB_59792| Best HMM Match : RVT_1 (HMM E-Value=4.2039e-45) 29 6.3
SB_51588| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_51388| Best HMM Match : RVT_1 (HMM E-Value=0) 29 6.3
SB_42960| Best HMM Match : RVT_1 (HMM E-Value=2.38221e-44) 29 6.3
SB_27537| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_27335| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_24880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_17181| Best HMM Match : RVT_1 (HMM E-Value=0) 29 6.3
SB_10994| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_7292| Best HMM Match : RVT_1 (HMM E-Value=0) 29 6.3
SB_2407| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_51544| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_45340| Best HMM Match : RVT_1 (HMM E-Value=1.2e-15) 29 6.3
SB_39321| Best HMM Match : RVT_1 (HMM E-Value=4.5e-39) 29 6.3
SB_38334| Best HMM Match : RVT_1 (HMM E-Value=5.60519e-45) 29 6.3
SB_33045| Best HMM Match : RVT_1 (HMM E-Value=3.4e-18) 29 6.3
SB_10962| Best HMM Match : PHD (HMM E-Value=5.3e-05) 29 6.3
>SB_11942| Best HMM Match : Ank (HMM E-Value=3.6e-22)
Length = 540
Score = 48.0 bits (109), Expect = 1e-05
Identities = 32/83 (38%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Frame = +2
Query: 89 FRNFINSLRPKQVTGNNVGKDYIGNTYFEIPASPSEG---KRKPSRWYDPPKGQDFQNP- 256
FR LRP + VG D GN Y+EI S S ++ R D P
Sbjct: 4 FRAIAGFLRPSR---RLVGTDLDGNKYYEIVRSGSHAGDMSQRTKREVVTKLKHDQYTPG 60
Query: 257 -IPAEWESWLRMRRKEPPSEEEI 322
P EWESW+R +R+EPP+ EEI
Sbjct: 61 TNPIEWESWIRGKREEPPTHEEI 83
>SB_6553| Best HMM Match : Complex1_17_2kD (HMM E-Value=2.50006e-41)
Length = 134
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2
Query: 140 VGKDYIGNTYFEIPASPSEGKRKPSRWYDPPKGQDFQNPIPAEWESWLRMRRKEPPSE 313
VG+D GN Y+E G+ + + + + +P EW WL +PPS+
Sbjct: 36 VGEDKYGNKYYE-NNKYLFGRNRFVEYPYAGRMEYHATQVPPEWHRWLHNMTDDPPSK 92
>SB_31104| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +2
Query: 404 SRQFQREGLSRTQLMMNILLETQKVSTQTKNEIVVIKYYGKTYSNCTSNTI 556
SR ++R G+ Q+ N+L T ST TKN I G TY+N S +
Sbjct: 45 SRCYERLGVIGVQVSANLLSRTSPSSTGTKN----ITTKGTTYNNKFSKVV 91
>SB_54640| Best HMM Match : TolA (HMM E-Value=1.7)
Length = 589
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 60 ENIDKYGALFLEISLIHLDQNRLLETMLVKI-T*VTLILKYLLVQVKVKESHHVGMIHLK 236
+NIDKY L+ E+ I+ +Q+ LE+M KI T + K ++ +K K + + +L+
Sbjct: 128 KNIDKYSELYDELMDINREQDLYLESMDPKIETTLNSEEKNIMDAIKAKNNTRDELDYLE 187
Query: 237 V 239
V
Sbjct: 188 V 188
>SB_59792| Best HMM Match : RVT_1 (HMM E-Value=4.2039e-45)
Length = 565
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 697 KYNKHIAVT*H*NNKMQGTLYSNFRLARCSCRYWLLC*MI 816
K++KHIA N+ G + NFR A C+ L C ++
Sbjct: 374 KWDKHIAQITSSANQTLGVIRRNFRTASVDCKSKLYCSLV 413
>SB_51588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 697 KYNKHIAVT*H*NNKMQGTLYSNFRLARCSCRYWLLC*MI 816
K++KHIA N+ G + NFR A C+ L C ++
Sbjct: 40 KWDKHIAQITSSANQTLGVIRRNFRTASVDCKSKLYCSLV 79
>SB_51388| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 670
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 697 KYNKHIAVT*H*NNKMQGTLYSNFRLARCSCRYWLLC*MI 816
K++KHIA N+ G + NFR A C+ L C ++
Sbjct: 374 KWDKHIAQITSSANQTLGVIRRNFRTASVDCKSKLYCSLV 413
>SB_42960| Best HMM Match : RVT_1 (HMM E-Value=2.38221e-44)
Length = 455
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 697 KYNKHIAVT*H*NNKMQGTLYSNFRLARCSCRYWLLC*MI 816
K++KHIA N+ G + NFR A C+ L C ++
Sbjct: 264 KWDKHIAQITSSANQTLGVIRRNFRTASVDCKSKLYCSLV 303
>SB_27537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 396
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 697 KYNKHIAVT*H*NNKMQGTLYSNFRLARCSCRYWLLC*MI 816
K++KHIA N+ G + NFR A C+ L C ++
Sbjct: 205 KWDKHIAQITSSANQTLGVIRRNFRTASVDCKSKLYCSLV 244
>SB_27335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 697 KYNKHIAVT*H*NNKMQGTLYSNFRLARCSCRYWLLC*MI 816
K++KHIA N+ G + NFR A C+ L C ++
Sbjct: 87 KWDKHIAQITSSANQTLGVIRRNFRTASVDCKSKLYCSLV 126
>SB_24880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 697 KYNKHIAVT*H*NNKMQGTLYSNFRLARCSCRYWLLC*MI 816
K++KHIA N+ G + NFR A C+ L C ++
Sbjct: 87 KWDKHIAQITSSANQTLGVIRRNFRTASVDCKSKLYCSLV 126
>SB_17181| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 668
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 697 KYNKHIAVT*H*NNKMQGTLYSNFRLARCSCRYWLLC*MI 816
K++KHIA N+ G + NFR A C+ L C ++
Sbjct: 477 KWDKHIAQITSSANQTLGVIRRNFRTASVDCKSKLYCSLV 516
>SB_10994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 185 SPSEGKRKPSRWYDPPKGQDFQNPIPAEWESWLR 286
+P+ R+ R PP + Q P+P W S LR
Sbjct: 43 TPAPPSRRSDRTPAPPSRRSDQTPVPPSWRSDLR 76
>SB_7292| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1126
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 697 KYNKHIAVT*H*NNKMQGTLYSNFRLARCSCRYWLLC*MI 816
K++KHIA N+ G + NFR A C+ L C ++
Sbjct: 935 KWDKHIAQITSSANQTLGVIRRNFRTASVDCKSKLYCSLV 974
>SB_2407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 697 KYNKHIAVT*H*NNKMQGTLYSNFRLARCSCRYWLLC*MI 816
K++KHIA N+ G + NFR A C+ L C ++
Sbjct: 43 KWDKHIAQITSSANQTLGVIRRNFRTASVDCKSKLYCSLV 82
>SB_51544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 697 KYNKHIAVT*H*NNKMQGTLYSNFRLARCSCRYWLLC*MI 816
K++KHIA N+ G + NFR A C+ L C ++
Sbjct: 40 KWDKHIAQITSSANQTLGVIRRNFRTASVDCKSKLYCSLV 79
>SB_45340| Best HMM Match : RVT_1 (HMM E-Value=1.2e-15)
Length = 447
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 697 KYNKHIAVT*H*NNKMQGTLYSNFRLARCSCRYWLLC*MI 816
K++KHIA N+ G + NFR A C+ L C ++
Sbjct: 256 KWDKHIAQITSSANQTLGVIRRNFRTASVDCKSKLYCSLV 295
>SB_39321| Best HMM Match : RVT_1 (HMM E-Value=4.5e-39)
Length = 900
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 697 KYNKHIAVT*H*NNKMQGTLYSNFRLARCSCRYWLLC*MI 816
K++KHIA N+ G + NFR A C+ L C ++
Sbjct: 709 KWDKHIAQITSSANQTLGVIRRNFRTASVDCKSKLYCSLV 748
>SB_38334| Best HMM Match : RVT_1 (HMM E-Value=5.60519e-45)
Length = 435
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 697 KYNKHIAVT*H*NNKMQGTLYSNFRLARCSCRYWLLC*MI 816
K++KHIA N+ G + NFR A C+ L C ++
Sbjct: 374 KWDKHIAQITSSANQTLGVIRRNFRTASVDCKSKLYCSLV 413
>SB_33045| Best HMM Match : RVT_1 (HMM E-Value=3.4e-18)
Length = 1061
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 697 KYNKHIAVT*H*NNKMQGTLYSNFRLARCSCRYWLLC*MI 816
K++KHIA N+ G + NFR A C+ L C ++
Sbjct: 870 KWDKHIAQITSSANQTLGVIRRNFRTASVDCKSKLYCSLV 909
>SB_10962| Best HMM Match : PHD (HMM E-Value=5.3e-05)
Length = 521
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 697 KYNKHIAVT*H*NNKMQGTLYSNFRLARCSCRYWLLC*MI 816
K++KHIA N+ G + NFR A C+ L C ++
Sbjct: 330 KWDKHIAQITSSANQTLGVIRRNFRTASVDCKSKLYCSLV 369
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,865,341
Number of Sequences: 59808
Number of extensions: 455611
Number of successful extensions: 1842
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1840
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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