Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0938
(849 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC033965-1|AAH33965.1| 169|Homo sapiens NDUFA12-like protein. 44 5e-04
BC001753-1|AAH01753.2| 169|Homo sapiens NDUFA12-like protein. 44 5e-04
AB183433-1|BAD91205.1| 169|Homo sapiens Myc-induced mitochondri... 44 5e-04
BC146776-1|AAI46777.1| 1542|Homo sapiens SET binding protein 1 p... 34 0.57
AB022660-1|BAA82444.1| 1542|Homo sapiens SET-binding protein (SE... 34 0.57
AB007897-1|BAA24826.2| 1605|Homo sapiens KIAA0437 protein. 34 0.57
DQ926461-1|ABI50565.1| 130|Homo sapiens immunoglobulin heavy ch... 30 9.2
AK222619-1|BAD96339.1| 146|Homo sapiens 13kDa differentiation-a... 30 9.2
AF103058-1|AAD16499.1| 124|Homo sapiens immunoglobulin heavy ch... 30 9.2
>BC033965-1|AAH33965.1| 169|Homo sapiens NDUFA12-like protein.
Length = 169
Score = 44.4 bits (100), Expect = 5e-04
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Frame = +2
Query: 137 NVGKDYIGNTYFEIPASPS-EGKR-KPSRWYDPP--KGQDFQ-NPIPAEWESWLRMRRKE 301
+VG D GN Y+ IP + G+ + R + K D++ IP EWE+W+R RK
Sbjct: 22 HVGTDQFGNKYYYIPQYKNWRGQTIREKRIVEAANKKEVDYEAGDIPTEWEAWIRRTRKT 81
Query: 302 PPSEEEI 322
PP+ EEI
Sbjct: 82 PPTMEEI 88
>BC001753-1|AAH01753.2| 169|Homo sapiens NDUFA12-like protein.
Length = 169
Score = 44.4 bits (100), Expect = 5e-04
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Frame = +2
Query: 137 NVGKDYIGNTYFEIPASPS-EGKR-KPSRWYDPP--KGQDFQ-NPIPAEWESWLRMRRKE 301
+VG D GN Y+ IP + G+ + R + K D++ IP EWE+W+R RK
Sbjct: 22 HVGTDQFGNKYYYIPQYKNWRGQTIREKRIVEAANKKEVDYEAGDIPTEWEAWIRRTRKT 81
Query: 302 PPSEEEI 322
PP+ EEI
Sbjct: 82 PPTMEEI 88
>AB183433-1|BAD91205.1| 169|Homo sapiens Myc-induced mitochondria
protein protein.
Length = 169
Score = 44.4 bits (100), Expect = 5e-04
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Frame = +2
Query: 137 NVGKDYIGNTYFEIPASPS-EGKR-KPSRWYDPP--KGQDFQ-NPIPAEWESWLRMRRKE 301
+VG D GN Y+ IP + G+ + R + K D++ IP EWE+W+R RK
Sbjct: 22 HVGTDQFGNKYYYIPQYKNWRGQTIREKRIVEAANKKEVDYEAGDIPTEWEAWIRRTRKT 81
Query: 302 PPSEEEI 322
PP+ EEI
Sbjct: 82 PPTMEEI 88
>BC146776-1|AAI46777.1| 1542|Homo sapiens SET binding protein 1
protein.
Length = 1542
Score = 34.3 bits (75), Expect = 0.57
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 176 IPASPSEGKRK--PSRWYDPPKGQDFQNPIPAEWESWLRMRRKEPPSEEEI 322
+P +P GKRK P PP+ Q P+P E E + +RK SE E+
Sbjct: 1490 LPKTPRGGKRKHKPQAPAQPPQQSPPQQPLPQEEEVKAKRQRKSRGSESEV 1540
>AB022660-1|BAA82444.1| 1542|Homo sapiens SET-binding protein (SEB)
protein.
Length = 1542
Score = 34.3 bits (75), Expect = 0.57
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 176 IPASPSEGKRK--PSRWYDPPKGQDFQNPIPAEWESWLRMRRKEPPSEEEI 322
+P +P GKRK P PP+ Q P+P E E + +RK SE E+
Sbjct: 1490 LPKTPRGGKRKHKPQAPAQPPQQSPPQQPLPQEEEVKAKRQRKSRGSESEV 1540
>AB007897-1|BAA24826.2| 1605|Homo sapiens KIAA0437 protein.
Length = 1605
Score = 34.3 bits (75), Expect = 0.57
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 176 IPASPSEGKRK--PSRWYDPPKGQDFQNPIPAEWESWLRMRRKEPPSEEEI 322
+P +P GKRK P PP+ Q P+P E E + +RK SE E+
Sbjct: 1553 LPKTPRGGKRKHKPQAPAQPPQQSPPQQPLPQEEEVKAKRQRKSRGSESEV 1603
>DQ926461-1|ABI50565.1| 130|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 130
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +1
Query: 283 ENEKKRTTIRRGNSKNVAIAQIKKENAAKIEMKRLAEGGSLPAVPERGPQSYPTYDEYST 462
++ K R TI R N KN++ QI A + A+ GS P PQ +D++
Sbjct: 62 DSVKGRFTISRDNHKNMSYLQINSLRAEDTAVYYCAKEGSGPYCGADCPQGVWYFDQWGQ 121
Query: 463 G 465
G
Sbjct: 122 G 122
>AK222619-1|BAD96339.1| 146|Homo sapiens 13kDa
differentiation-associated protein variant protein.
Length = 146
Score = 30.3 bits (65), Expect = 9.2
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = +2
Query: 131 GNNVGKDYIGNTYFEIPASPSEGKRKPSRWYDPPKGQDF-----QNPIPAEWESWLRMRR 295
G VG+D GN Y+E G+ + + G++ + +P EW WL
Sbjct: 36 GTLVGEDKYGNKYYEDNNKQFFGRHRWVVYTSEMNGKNTFWDVDGSMVPPEWHRWLHSMT 95
Query: 296 KEPPSEEEI 322
+PP+ + +
Sbjct: 96 DDPPTTKPL 104
>AF103058-1|AAD16499.1| 124|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 124
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 253 SNTSRMGVLVENEKKRTTIRRGNSKNVAIAQIKKENAAKIEMKRLAEGGSLPAVP 417
S+TS + V++ K R TI R N+KN Q+ + A+GG +P VP
Sbjct: 42 SSTSFVIYYVDSVKGRFTISRDNAKNTLYLQMNSLRTEDTAVYYCAKGG-IPVVP 95
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,189,597
Number of Sequences: 237096
Number of extensions: 2166229
Number of successful extensions: 4543
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4542
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -