Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0938
         (849 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117204-36|CAB55150.2|  138|Caenorhabditis elegans Hypothetical...    53   3e-07
Z75552-8|CAD54158.1|  939|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z75552-7|CAA99943.3|  944|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z75539-5|CAD54134.1|  939|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z75539-4|CAA99846.3|  944|Caenorhabditis elegans Hypothetical pr...    31   1.4  
AC024876-8|AAF60889.1|  187|Caenorhabditis elegans Hypothetical ...    29   3.2  
U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical pr...    28   9.6  
U13644-4|AAB52682.1|  412|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>AL117204-36|CAB55150.2|  138|Caenorhabditis elegans Hypothetical
           protein Y116A8C.30a protein.
          Length = 138

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 31/83 (37%), Positives = 42/83 (50%)
 Frame = +2

Query: 77  WRIVFRNFINSLRPKQVTGNNVGKDYIGNTYFEIPASPSEGKRKPSRWYDPPKGQDFQNP 256
           W  V  N    +R      N V +D  GN ++EI    S  ++  SR +DPP     Q P
Sbjct: 7   WGRVASNLWKYVRGDFSKKNYVAEDGSGNRFYEI----SNSRQNVSRGFDPPSSGAQQEP 62

Query: 257 IPAEWESWLRMRRKEPPSEEEIA 325
              EW++WLR  R+ PPS+ EIA
Sbjct: 63  -DLEWQAWLRGTRRFPPSDREIA 84


>Z75552-8|CAD54158.1|  939|Caenorhabditis elegans Hypothetical
           protein F28C1.3b protein.
          Length = 939

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = +1

Query: 253 SNTSRMGVLVENEKKRTTIRRGNSKNVAIAQIKKE---NAAKIEMKRLAEGGSLPAVPER 423
           SN++   +L  +          +S + ++  IKK     AA      LAE GSLPA+P+ 
Sbjct: 628 SNSTMQNLLTVSYGSNPGPLDSSSNSESMKTIKKSFTVTAASSSSLPLAEWGSLPALPQA 687

Query: 424 GPQSYP 441
            P S P
Sbjct: 688 SPSSTP 693


>Z75552-7|CAA99943.3|  944|Caenorhabditis elegans Hypothetical
           protein F28C1.3a protein.
          Length = 944

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = +1

Query: 253 SNTSRMGVLVENEKKRTTIRRGNSKNVAIAQIKKE---NAAKIEMKRLAEGGSLPAVPER 423
           SN++   +L  +          +S + ++  IKK     AA      LAE GSLPA+P+ 
Sbjct: 633 SNSTMQNLLTVSYGSNPGPLDSSSNSESMKTIKKSFTVTAASSSSLPLAEWGSLPALPQA 692

Query: 424 GPQSYP 441
            P S P
Sbjct: 693 SPSSTP 698


>Z75539-5|CAD54134.1|  939|Caenorhabditis elegans Hypothetical
           protein F28C1.3b protein.
          Length = 939

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = +1

Query: 253 SNTSRMGVLVENEKKRTTIRRGNSKNVAIAQIKKE---NAAKIEMKRLAEGGSLPAVPER 423
           SN++   +L  +          +S + ++  IKK     AA      LAE GSLPA+P+ 
Sbjct: 628 SNSTMQNLLTVSYGSNPGPLDSSSNSESMKTIKKSFTVTAASSSSLPLAEWGSLPALPQA 687

Query: 424 GPQSYP 441
            P S P
Sbjct: 688 SPSSTP 693


>Z75539-4|CAA99846.3|  944|Caenorhabditis elegans Hypothetical
           protein F28C1.3a protein.
          Length = 944

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = +1

Query: 253 SNTSRMGVLVENEKKRTTIRRGNSKNVAIAQIKKE---NAAKIEMKRLAEGGSLPAVPER 423
           SN++   +L  +          +S + ++  IKK     AA      LAE GSLPA+P+ 
Sbjct: 633 SNSTMQNLLTVSYGSNPGPLDSSSNSESMKTIKKSFTVTAASSSSLPLAEWGSLPALPQA 692

Query: 424 GPQSYP 441
            P S P
Sbjct: 693 SPSSTP 698


>AC024876-8|AAF60889.1|  187|Caenorhabditis elegans Hypothetical
           protein Y94H6A.8 protein.
          Length = 187

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
 Frame = +2

Query: 131 GNNVGKDYIGNTYFEIPASPSEGKRKPSRWYDPPKGQ--DFQ-NPIPAEWESWLRMRRKE 301
           G  VG D  GN Y+E  A         +RW + P     D+    +P EW SWL     +
Sbjct: 82  GTLVGSDNFGNRYYENNAYFVPR----NRWVEFPDKVWLDYDATQVPPEWHSWLHHITDD 137

Query: 302 PPS 310
            PS
Sbjct: 138 APS 140


>U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical
           protein F40F4.6 protein.
          Length = 2214

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -2

Query: 248 GNPDL*VDHTNVMAFFYLHLD*QVFQNKCYLCNLYQHC 135
           GN     D + +  FFY H+   +F+++  L   Y HC
Sbjct: 582 GNTFYFSDRSTISTFFYRHMLNTLFRSQLVLSGDYSHC 619


>U13644-4|AAB52682.1|  412|Caenorhabditis elegans Hypothetical
           protein F56D2.3 protein.
          Length = 412

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +2

Query: 149 DYIGNTYFEIPASPS-EGKRKPSRWYDPPKGQDFQNPIPAEWESWLRMRRK 298
           DY+ N Y+  P  P+ E +R+PS   +PP+G  F    P ++  +  MR +
Sbjct: 160 DYV-NAYYGFPTIPTQEPRRRPSFNMNPPQGY-FHREHPFDFGPFGYMRAR 208


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,399,659
Number of Sequences: 27780
Number of extensions: 361202
Number of successful extensions: 936
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)