Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0938
         (849 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                29   0.071
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   2.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   2.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   6.2  

>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 0.071
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = +3

Query: 117 QNRLLETMLVKIT*VTLILKYLLVQVKVKESHHVGMIHLKVRISKIQYQPNGSP 278
           QNRL E +L+K   +  ILK +   ++    H+ G++H  V+   I    NG P
Sbjct: 144 QNRLDEAILIKNERIC-ILKSITCALQF--CHNAGIVHADVKPKNILMSKNGQP 194


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
 Frame = -1

Query: 396 ALCKPLHFNFSSILLLYLGYSNIFAISSSDG-GSFLLILNQDSHSAGIG---FWKS 241
           A  KPL  N    L++Y  Y   F  S+ DG G    I  +  H   +G   FW S
Sbjct: 17  AAWKPLPENLKEDLIVYQVYPRSFKDSNGDGIGDIEGIKEKLDHFLEMGVDMFWLS 72


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
 Frame = -1

Query: 396 ALCKPLHFNFSSILLLYLGYSNIFAISSSDG-GSFLLILNQDSHSAGIG---FWKS 241
           A  KPL  N    L++Y  Y   F  S+ DG G    I  +  H   +G   FW S
Sbjct: 17  AAWKPLPENLKEDLIVYQVYPRSFKDSNGDGIGDIEGIKEKLDHFLEMGVDMFWLS 72


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +2

Query: 746 KEHFIVISDLQDVLVDI 796
           K+  +VIS++Q V+VD+
Sbjct: 569 KDRVLVISEIQMVIVDV 585


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,415
Number of Sequences: 438
Number of extensions: 4594
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)