Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0937
         (756 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024843-9|AAF60836.1|  263|Caenorhabditis elegans Hypothetical ...    31   0.67 
AC006723-3|AAF59427.1|  881|Caenorhabditis elegans Hypothetical ...    30   1.5  
AF038604-2|AAB92013.1|  468|Caenorhabditis elegans Hypothetical ...    30   2.0  
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    29   4.7  
Z68215-2|CAA92451.2|  452|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical...    28   6.2  
U58753-5|AAC24434.2|  348|Caenorhabditis elegans Hypothetical pr...    28   8.2  
AF000299-3|AAW88403.1|  342|Caenorhabditis elegans Serpentine re...    28   8.2  
AF000299-2|AAC47981.2|  324|Caenorhabditis elegans Serpentine re...    28   8.2  

>AC024843-9|AAF60836.1|  263|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.9 protein.
          Length = 263

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = -1

Query: 360 ASPSRPAEIMPLSQRTQKPRYSPPLRIPGLSISTLSGLVLFFLMTLLAFPQPP 202
           A+PS P  I     +T+KP  S P +I   S +  +  +  F  TL + P  P
Sbjct: 186 ANPSLPVHIQTFRVKTRKPVLSRPTKIRFSSEADRNSFIFSFSKTLRSLPDRP 238


>AC006723-3|AAF59427.1|  881|Caenorhabditis elegans Hypothetical
           protein Y19D10B.4 protein.
          Length = 881

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/73 (26%), Positives = 35/73 (47%)
 Frame = +3

Query: 492 TQPPLATLEATEETYPLRLEEPVYGLMFQEVKYLLAPLWEDRTAQENLCMWLVLFTKVPR 671
           TQP L  ++  ++TYP +++     L+F +     A  W  R   +N    ++  + + R
Sbjct: 181 TQPVLTAIQNAQQTYP-KMQAHALVLVFTDSPASDATAWSHRFTDKNAEQSVLQISLIWR 239

Query: 672 SLVNSFLLMVALT 710
           S  + FL + A T
Sbjct: 240 SKYSFFLSLPART 252


>AF038604-2|AAB92013.1|  468|Caenorhabditis elegans Hypothetical
           protein B0546.3 protein.
          Length = 468

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 20/53 (37%), Positives = 26/53 (49%)
 Frame = -2

Query: 731 VQYHPMERKRNHEKERVYQGSWHLREQHEPHTEVLLSSPVLPQRRQEVLDLLK 573
           VQ+  +E     E    YQ    LRE +     V L  P L QRRQE+LD ++
Sbjct: 292 VQFENLEHIIGEEHHAEYQ---QLREDYR-QAHVDLIGPELEQRRQEILDRMR 340


>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
           protein F21E9.1 protein.
          Length = 1170

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 18/63 (28%), Positives = 35/63 (55%)
 Frame = -3

Query: 364 NSFTLASSGDNAAIPTNPKTTIFPSVKNSGAFNFNLIGLGSIFPDDALSVSPASNHHLIH 185
           +S  L+S   N +  + P+T+    +  S +F+F+L       P  +L +SP  ++H+IH
Sbjct: 261 SSLLLSSINSNLSHNSIPQTSP-KRISQSSSFSFSL-------PPSSLPLSPKIDNHVIH 312

Query: 184 RIR 176
           +I+
Sbjct: 313 KIK 315


>Z68215-2|CAA92451.2|  452|Caenorhabditis elegans Hypothetical
           protein C53B4.2 protein.
          Length = 452

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 324 IAALSPLDARVKLFHSYLGLIPNLSQFTTSE 416
           I A SPLD + K+F   +   P LS++TT E
Sbjct: 189 IKATSPLDDKSKMFMDRIVKKPYLSKYTTKE 219


>AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical
           protein F32D1.7 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 399 GKGSGSDQDMNGIASPSRPAEIMPLSQRTQKPRYSP 292
           G GSGS  D +G + P+R +  +P +     PR  P
Sbjct: 159 GSGSGSGNDSSGSSGPTRMSGQVPSTSGPPPPRPPP 194


>U58753-5|AAC24434.2|  348|Caenorhabditis elegans Hypothetical
           protein W03B1.6 protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 102 ETGKNWY*RLSSVATSMTLAMIVV 31
           ET + WY +LSS +T+M +A++ V
Sbjct: 15  ETFEKWYLKLSSTSTAMLIAILFV 38


>AF000299-3|AAW88403.1|  342|Caenorhabditis elegans Serpentine
           receptor, class z protein24, isoform a protein.
          Length = 342

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +3

Query: 648 VLFTKVPRSLVNSFLLMVALTFHGVVL 728
           ++FT +  S+VNS+L+   LT  G++L
Sbjct: 94  IIFTVISTSVVNSWLIFSILTITGLIL 120


>AF000299-2|AAC47981.2|  324|Caenorhabditis elegans Serpentine
           receptor, class z protein24, isoform b protein.
          Length = 324

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +3

Query: 648 VLFTKVPRSLVNSFLLMVALTFHGVVL 728
           ++FT +  S+VNS+L+   LT  G++L
Sbjct: 94  IIFTVISTSVVNSWLIFSILTITGLIL 120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,928,294
Number of Sequences: 27780
Number of extensions: 374573
Number of successful extensions: 1091
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)