Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0936
         (541 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81127-1|CAB03386.1|  325|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U41550-1|AAA83284.1| 1057|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z71259-11|CAI46575.1|  370|Caenorhabditis elegans Hypothetical p...    29   2.1  
Z71259-10|CAA95794.4|  373|Caenorhabditis elegans Hypothetical p...    29   2.1  
AL110477-1|CAB54325.1|  331|Caenorhabditis elegans Hypothetical ...    29   2.1  
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr...    28   3.7  
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr...    28   3.7  
Z78543-3|CAB01755.2|  772|Caenorhabditis elegans Hypothetical pr...    28   3.7  
U61953-13|AAO91705.1|  219|Caenorhabditis elegans Hypothetical p...    28   3.7  
U61953-12|AAC48073.1|  348|Caenorhabditis elegans Hypothetical p...    28   3.7  
AF036706-14|AAK39276.2|  390|Caenorhabditis elegans Kinase, glh-...    28   3.7  
AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical ...    28   4.9  
AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage...    28   4.9  
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu...    27   6.5  
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AF016687-1|AAC48094.2|  315|Caenorhabditis elegans Dumpy : short...    27   8.6  
AC006673-7|AAF39925.2|  332|Caenorhabditis elegans Serpentine re...    27   8.6  

>Z81127-1|CAB03386.1|  325|Caenorhabditis elegans Hypothetical
           protein T22G5.1 protein.
          Length = 325

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 20/57 (35%), Positives = 30/57 (52%)
 Frame = +2

Query: 26  MNFLTILHVFRIAAFCSEINMLSFKSRSFKLLWMWFGTTPVVEIIIGTMYAFFCFQI 196
           M++LT L    IAAF   + +L+ K ++ +LL +     P     I  M AFF F+I
Sbjct: 1   MDYLTFLAWVIIAAFFYLLTLLALKFKTIRLLILLLAFLP-----IAIMLAFFIFRI 52


>U41550-1|AAA83284.1| 1057|Caenorhabditis elegans Hypothetical
           protein R04A9.2 protein.
          Length = 1057

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 23/106 (21%), Positives = 46/106 (43%)
 Frame = -2

Query: 534 LTQTDYTHRHNQLANIIHQQLALKHKLIQNTNTPYYNYKPQTVLENDSCKLYYDRAILTD 355
           LT+ D++ +  ++ ++I ++     ++   TN P Y   P  +   +  +L      +TD
Sbjct: 206 LTEADFSPQEWKIVSLISRRSGSTFEIRIKTNPPIYTRGPNALTLENRSELTRIIEAITD 265

Query: 354 RTIHYNRPDITLQDKNNKVTYIIDIAVPNTHNIQKTFTEKMTKYTE 217
           + +H  +    L       T   DIA P+   + K+   K TK  +
Sbjct: 266 QCLHNEK--FLLYSSGTFPTKGGDIASPDEVTLIKSGFVKTTKIVD 309


>Z71259-11|CAI46575.1|  370|Caenorhabditis elegans Hypothetical
           protein F13G3.7b protein.
          Length = 370

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2

Query: 222 TELKEEIVRIWKQKKAYIVPIIISTTGVVPNHIHNSL 112
           T  +E IVR+WK +KA +      T G+ P  ++N+L
Sbjct: 312 TTYRETIVRLWKYEKAQVF-----TKGLAPRMVNNAL 343


>Z71259-10|CAA95794.4|  373|Caenorhabditis elegans Hypothetical
           protein F13G3.7a protein.
          Length = 373

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2

Query: 222 TELKEEIVRIWKQKKAYIVPIIISTTGVVPNHIHNSL 112
           T  +E IVR+WK +KA +      T G+ P  ++N+L
Sbjct: 315 TTYRETIVRLWKYEKAQVF-----TKGLAPRMVNNAL 346


>AL110477-1|CAB54325.1|  331|Caenorhabditis elegans Hypothetical
           protein Y113G7B.2 protein.
          Length = 331

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 22/66 (33%), Positives = 37/66 (56%)
 Frame = +2

Query: 137 TTPVVEIIIGTMYAFFCFQILTISSLSSVYFVIFSVNVF*MLWVFGTAMSIM*VTLLFLS 316
           T  ++ I I  +Y FFC    T S+++SV + + +V+VF  L  F  A+S+   T  F+ 
Sbjct: 24  TISIISIPI-YIYGFFCILCKTPSTMNSVKWSMINVHVFSCL--FDLALSLF--TAPFVL 78

Query: 317 CKVISG 334
             V++G
Sbjct: 79  FPVLAG 84


>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
           protein F29G6.3c protein.
          Length = 1453

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -2

Query: 264 HNIQKTFTEKMTKYTELKEEIVRIWKQKKAYIVPIIISTTGV-VPNHIHNS 115
           HN+    TE++     L+EE V +     AY+ PI +        +HI+N+
Sbjct: 401 HNVGPKITEELRPAAVLEEEEVEVRPPVMAYVAPIPVKPPRTHEESHIYNA 451


>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
           protein F29G6.3b protein.
          Length = 1785

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -2

Query: 264 HNIQKTFTEKMTKYTELKEEIVRIWKQKKAYIVPIIISTTGV-VPNHIHNS 115
           HN+    TE++     L+EE V +     AY+ PI +        +HI+N+
Sbjct: 401 HNVGPKITEELRPAAVLEEEEVEVRPPVMAYVAPIPVKPPRTHEESHIYNA 451


>Z78543-3|CAB01755.2|  772|Caenorhabditis elegans Hypothetical
           protein F29G6.3a protein.
          Length = 772

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -2

Query: 264 HNIQKTFTEKMTKYTELKEEIVRIWKQKKAYIVPIIISTTGV-VPNHIHNS 115
           HN+    TE++     L+EE V +     AY+ PI +        +HI+N+
Sbjct: 401 HNVGPKITEELRPAAVLEEEEVEVRPPVMAYVAPIPVKPPRTHEESHIYNA 451


>U61953-13|AAO91705.1|  219|Caenorhabditis elegans Hypothetical
           protein R08C7.2b protein.
          Length = 219

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -3

Query: 392 PVNFIMIALFLPIGRFTTI--DRISLYKIKTIKSPTLLTLQSRIPTTF 255
           P  F++ A+FLPIG F  I  D +S + ++     +   LQ  +P  F
Sbjct: 55  PTVFVIGAIFLPIGVFLFIASDAVSEFTVEYTNCLSPCQLQINLPNAF 102


>U61953-12|AAC48073.1|  348|Caenorhabditis elegans Hypothetical
           protein R08C7.2a protein.
          Length = 348

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -3

Query: 392 PVNFIMIALFLPIGRFTTI--DRISLYKIKTIKSPTLLTLQSRIPTTF 255
           P  F++ A+FLPIG F  I  D +S + ++     +   LQ  +P  F
Sbjct: 55  PTVFVIGAIFLPIGVFLFIASDAVSEFTVEYTNCLSPCQLQINLPNAF 102


>AF036706-14|AAK39276.2|  390|Caenorhabditis elegans Kinase,
           glh-binding protein 1 protein.
          Length = 390

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -2

Query: 507 HNQLANIIHQQL-ALKHKLIQNTNTPYYNYKPQTVLENDSCKL 382
           H  L+  ++Q L A+KH  + N+   + + KP  ++ ND C L
Sbjct: 138 HKTLSFFVYQSLCAIKH--LHNSGVIHRDLKPSNIVVNDRCVL 178


>AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical
            protein Y39A1B.3 protein.
          Length = 1499

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -1

Query: 193  LETEKSIHSPNNNLNHWSCSKPHPQQLKASRFKR*HIYFTTK 68
            ++ +  +H   +N  HWS    HP   K  R    H++ T+K
Sbjct: 1346 VQNDGGLHRLQDNWRHWSKFMCHPSVAKEYRMMVEHMHSTSK 1387


>AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage
            compensation protein protein.
          Length = 1455

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -1

Query: 193  LETEKSIHSPNNNLNHWSCSKPHPQQLKASRFKR*HIYFTTK 68
            ++ +  +H   +N  HWS    HP   K  R    H++ T+K
Sbjct: 1302 VQNDGGLHRLQDNWRHWSKFMCHPSVAKEYRMMVEHMHSTSK 1343


>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
            (myotubularin) family protein 5 protein.
          Length = 1744

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 190  ETEKSIHSPNNNLNHWSCSKP 128
            + EK +HSPNN L   S S P
Sbjct: 1617 QAEKMLHSPNNTLTRESMSPP 1637


>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
            ZC116.3 protein.
          Length = 3871

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -2

Query: 309  NNKVTYIIDIAVPNTHNIQKTFTEKMTKYTELKEE 205
            N   T I  +  PN+H+    FT+     T+L EE
Sbjct: 3754 NKSYTQIFTLRPPNSHDCSIIFTDVSISMTQLPEE 3788


>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
            ZC116.3 protein.
          Length = 3871

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -2

Query: 309  NNKVTYIIDIAVPNTHNIQKTFTEKMTKYTELKEE 205
            N   T I  +  PN+H+    FT+     T+L EE
Sbjct: 3754 NKSYTQIFTLRPPNSHDCSIIFTDVSISMTQLPEE 3788


>AF016687-1|AAC48094.2|  315|Caenorhabditis elegans Dumpy : shorter
           than wild-typeprotein 9 protein.
          Length = 315

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -2

Query: 282 IAVPNTHN-IQKTFTEKMTKYTELKEEIVRIWKQKK 178
           I +P  HN +QK  T  +T+    K E   IWKQ K
Sbjct: 27  IGLPLMHNHVQKVTTLMLTEVELCKTESQDIWKQMK 62


>AC006673-7|AAF39925.2|  332|Caenorhabditis elegans Serpentine
           receptor, class h protein4 protein.
          Length = 332

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +2

Query: 53  FRIAAFCSEINMLSFKSRSFKLLWMWFGTTPVVEIIIGTMYAFFCFQILTISSLSSV 223
           F+   +C      +F S +F+    WF    VV +++G     F F + T+ +L SV
Sbjct: 175 FKPYMWCDNCFFCNFDSLTFR----WFFYVAVVAVVLGGFTGGFAFHV-TVQALKSV 226


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,105,752
Number of Sequences: 27780
Number of extensions: 249836
Number of successful extensions: 838
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)