Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0936
(541 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 26 0.21
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 26 0.21
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 26 0.21
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 26 0.21
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 26 0.21
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 25 0.37
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 25 0.37
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 1.5
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 23 2.6
DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein. 21 6.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 8.1
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.21
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -3
Query: 365 FLPIGRFTTIDRISLYKIKTIKSPTLLTLQSRIPTTFKKRLQKR 234
F P+GRF D + IKS T Q ++ +K +K+
Sbjct: 418 FPPLGRFAVRDMRQTVAVGVIKSVTFKDTQGKVTKAAEKAQKKK 461
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 26.2 bits (55), Expect = 0.21
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 471 ALKHKLIQNTNTPYYNYKPQTVLENDSC-KLYYD 373
+L +K I N N YNY N++C KLYY+
Sbjct: 84 SLSNKTIHNNNNYKYNYNNNNY--NNNCKKLYYN 115
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 26.2 bits (55), Expect = 0.21
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 471 ALKHKLIQNTNTPYYNYKPQTVLENDSC-KLYYD 373
+L +K I N N YNY N++C KLYY+
Sbjct: 84 SLSNKTIHNNNNYKYNYNNNNY--NNNCKKLYYN 115
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 26.2 bits (55), Expect = 0.21
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 471 ALKHKLIQNTNTPYYNYKPQTVLENDSC-KLYYD 373
+L +K I N N YNY N++C KLYY+
Sbjct: 84 SLSNKTIHNNNNYKYNYNNNNY--NNNCKKLYYN 115
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 26.2 bits (55), Expect = 0.21
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 526 DRLHSQTQPTCQYYP 482
DRLH +T P +YYP
Sbjct: 711 DRLHYETDPCVRYYP 725
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.4 bits (53), Expect = 0.37
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -2
Query: 471 ALKHKLIQNTNTPYYNYKPQTVLENDSC--KLYYDRAIL 361
+L +K I N N YNY + N++ KLYY I+
Sbjct: 84 SLSNKTIHNNNNYKYNYNNKYNYNNNNYNKKLYYKNYII 122
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 25.4 bits (53), Expect = 0.37
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -2
Query: 453 IQNTNTPYYNYKPQTVLENDSCKLYYDRAILTDRTIH 343
+ + PY ++K C++ YD A L+D IH
Sbjct: 157 VPTDDEPYASFKAMEDSVGGKCEVLYDIAPLSDFVIH 193
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.5
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 471 ALKHKLIQNTNTPYYNYKPQTVLENDSC-KLYYD 373
+L +K I N N YNY N++C KLYY+
Sbjct: 84 SLSNKTIHNNNNYKYNY-------NNNCKKLYYN 110
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 22.6 bits (46), Expect = 2.6
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = +3
Query: 498 VGCVCECNLS 527
+GC+CEC+L+
Sbjct: 1 MGCLCECDLA 10
>DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein.
Length = 135
Score = 21.4 bits (43), Expect = 6.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 496 KLVVSVSVICLCKG 537
K +V +S IC+C G
Sbjct: 2 KTIVIISAICVCVG 15
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 8.1
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1
Query: 499 LVVSVSVICLCKGK 540
++V+V VIC+ +GK
Sbjct: 1598 IIVAVIVICVLRGK 1611
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -2
Query: 471 ALKHKLIQNTNTPYYNYKPQTVLEND 394
+L +K I N N YNY N+
Sbjct: 317 SLSNKTIHNNNNYKYNYNNNNYNNNN 342
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,698
Number of Sequences: 438
Number of extensions: 3639
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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