Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0936
(541 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g58602.1 68414.m06655 disease resistance protein (CC-NBS-LRR ... 31 0.37
At4g21810.1 68417.m03155 Der1-like family protein / degradation ... 30 0.86
At2g13100.1 68415.m01436 glycerol-3-phosphate transporter, putat... 29 1.5
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 29 2.6
At4g20940.1 68417.m03034 leucine-rich repeat family protein cont... 28 3.5
At1g63350.1 68414.m07161 disease resistance protein (CC-NBS-LRR ... 28 3.5
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 28 3.5
At4g04860.1 68417.m00708 Der1-like family protein / degradation ... 28 4.6
At2g42880.1 68415.m05309 mitogen-activated protein kinase, putat... 28 4.6
At1g33890.1 68414.m04201 avirulence-responsive protein, putative... 28 4.6
At5g61620.1 68418.m07732 myb family transcription factor contain... 27 6.1
At5g49730.1 68418.m06158 ferric reductase-like transmembrane com... 27 6.1
At1g53430.1 68414.m06056 leucine-rich repeat family protein / pr... 27 6.1
At5g66590.1 68418.m08394 allergen V5/Tpx-1-related family protei... 27 8.0
At5g11180.1 68418.m01307 glutamate receptor family protein (GLR2... 27 8.0
>At1g58602.1 68414.m06655 disease resistance protein (CC-NBS-LRR
class), putative similar to diesease resistance protein
rpp8 [Arabidopsis thaliana] gi|3901294|gb|AAC78631
Length = 1138
Score = 31.5 bits (68), Expect = 0.37
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -2
Query: 456 LIQNTNTPYYNYKPQTVLENDSCKLY 379
++ TNT Y+N+KP+ + +DS KL+
Sbjct: 309 IVAPTNTKYFNFKPECLKTDDSWKLF 334
>At4g21810.1 68417.m03155 Der1-like family protein / degradation in
the ER-like family protein contains Pfam profile:
PF04511 Der1-like family
Length = 244
Score = 30.3 bits (65), Expect = 0.86
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 5 VWFSSSCMNFLTILHVFRIAAFCSEINMLSFKSRSFKLLWM-WFGTTPVVEII-IGTMYA 178
++F ++FL H+F +A +C + SF+ ++ L+M FG T + I+ IG M
Sbjct: 61 LYFRKMDLDFL--FHMFFLARYCKLLEENSFRGKTTDFLYMLLFGATVLTGIVLIGGMIP 118
Query: 179 FFCFQILTISSLSS 220
+ I LS+
Sbjct: 119 YLSVSFSKIIFLSN 132
>At2g13100.1 68415.m01436 glycerol-3-phosphate transporter, putative
/ glycerol 3-phosphate permease, putative similar to
glycerol-3-phosphate transporter (glycerol 3-phosphate
permease) [Homo sapiens] GI:7543982; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 493
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/59 (23%), Positives = 32/59 (54%)
Frame = +2
Query: 158 IIGTMYAFFCFQILTISSLSSVYFVIFSVNVF*MLWVFGTAMSIM*VTLLFLSCKVISG 334
++G + A F + +L+S+ F+ S+ M V+G+ + + L+F+S +++G
Sbjct: 339 VLGGISAGFISDKIKARALTSITFLALSIPALIMYRVYGSVSMFINIVLMFISGLLVNG 397
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -2
Query: 522 DYTHRHNQLANIIHQQL-ALKHKLIQNTNTPYYNYKPQTVLENDSCKL 382
D T H+Q ++Q L ALK+ + N + + KP+ +L N +CKL
Sbjct: 110 DLTREHHQF--FLYQMLRALKY--MHTANVYHRDLKPKNILANANCKL 153
>At4g20940.1 68417.m03034 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to leucine-rich
repeat receptor-like protein kinase INRPK1 [Ipomoea nil]
gi|14495542|gb|AAB36558
Length = 977
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Frame = -2
Query: 153 STTGVVPNHIHN--SLKLLDLKDNIFIS 76
S +GV+PN + + SL+ LDL DN+F S
Sbjct: 89 SLSGVLPNDLGSFKSLQFLDLSDNLFSS 116
>At1g63350.1 68414.m07161 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 898
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 306 NKVTYIIDIAVPNTHNIQKTFTEKMTKYTELK 211
NKV+ +D+ V THN++K T ELK
Sbjct: 14 NKVSQWLDMKVSYTHNLEKNLVALETTMEELK 45
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -2
Query: 522 DYTHRHNQLANIIHQQLALKHKLIQNTNTPYYNYKPQTVLENDSCKL 382
D T H+Q ++Q L K + N + + KP+ +L N +CKL
Sbjct: 110 DLTREHHQF--FLYQMLRAL-KFMHTANVYHRDLKPKNILANANCKL 153
>At4g04860.1 68417.m00708 Der1-like family protein / degradation in
the ER-like family protein contains Pfam profile:
PF04511 Der1-like family
Length = 244
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 5 VWFSSSCMNFLTILHVFRIAAFCSEINMLSFKSRSFKLLWM-WFGTTPVVEII-IGTMYA 178
++F ++F+ H+F +A +C + SF+ ++ L+M FG + + I+ IG M
Sbjct: 61 LYFRKMDLDFM--FHMFFLARYCKLLEENSFRGKTADFLYMLLFGASVLTGIVLIGGMIP 118
Query: 179 FFCFQILTISSLSS 220
+ I LS+
Sbjct: 119 YLSASFAKIIFLSN 132
>At2g42880.1 68415.m05309 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK20) mitogen-activated protein
kinase (MAPK)(AtMPK20), PMID:12119167
Length = 606
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -2
Query: 522 DYTHRHNQLANIIHQQL-ALKHKLIQNTNTPYYNYKPQTVLENDSCKL 382
D T H Q ++Q L ALK+ I N + + KP+ +L N +CKL
Sbjct: 122 DLTREHYQF--FLYQLLRALKY--IHTANVYHRDLKPKNILANANCKL 165
>At1g33890.1 68414.m04201 avirulence-responsive protein, putative /
avirulence induced gene protein, putative / AIG protein,
putative similar to SP|P54120 AIG1 protein {Arabidopsis
thaliana}; contains Pfam profile PF04548: AIG1 family
Length = 334
Score = 27.9 bits (59), Expect = 4.6
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = -2
Query: 357 DRTIHYNRPDITLQDKNNKVT----YIIDIAVPNTHNIQKTFTEKMTKYTELKEEIVRIW 190
DR + +N +DK+ KV ++ +A N K F KM Y E+KEE +
Sbjct: 172 DRKVMFNN---MTKDKHKKVEQVQQFLALVAKVEERNEGKPFRGKM--YLEIKEETEWLK 226
Query: 189 KQKKA 175
KQKKA
Sbjct: 227 KQKKA 231
>At5g61620.1 68418.m07732 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 317
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -2
Query: 513 HRHNQLANIIHQQLALKHKLIQNTNTPYYNYKPQTVLENDSCKLYYDRAILTDRTIH 343
H +++N Q L++++ I PYYN+ P ++ + + +YY + R +H
Sbjct: 208 HTQTEISNRF-QNLSMEYMPIYQPIPPYYNFPP--IMYHPNYPMYYANPQVPVRFVH 261
>At5g49730.1 68418.m06158 ferric reductase-like transmembrane
component family protein similar to ferric-chelate
reductase (FRO1) [Pisum sativum] GI:15341529; contains
Pfam profile PF01794: Ferric reductase like
transmembrane componenent
Length = 738
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 164 GTMYAFFCFQILTISSLSSVYFVI 235
GTM+ F IL IS L+S+Y +I
Sbjct: 69 GTMFLIFSCPILVISVLASLYLII 92
>At1g53430.1 68414.m06056 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1030
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -2
Query: 153 STTGVVPNHIHNSLKLLDLKDNIF 82
S TG VP I NS + LDL DN F
Sbjct: 333 SLTGPVPQFIINSKENLDLSDNNF 356
>At5g66590.1 68418.m08394 allergen V5/Tpx-1-related family protein
contains similarity to SP|Q41495 STS14 protein precursor
{Solanum tuberosum}; contains Pfam profile PF00188:
SCP-like extracellular protein
Length = 185
Score = 27.1 bits (57), Expect = 8.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 435 PYYNYKPQTVLENDSCKLY 379
P+YNYK T N +C +Y
Sbjct: 125 PFYNYKSDTCAANHTCGVY 143
>At5g11180.1 68418.m01307 glutamate receptor family protein (GLR2.6)
plant glutamate receptor family, PMID:11379626
Length = 906
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 243 TEKMTKYTELKEEIVRIWKQKKAYIVPIIISTTGVVPNHIHNSLK-LLDLKDNIFI 79
T K+ E E V WK K + + ++ TG+ +H + L+ ++ D IF+
Sbjct: 394 TFKIVNIEESGERTVGFWKSKVGLVKSLRVNQTGIKISHSSHRLRPIIWPGDTIFV 449
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,024,601
Number of Sequences: 28952
Number of extensions: 215607
Number of successful extensions: 723
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1003808112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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