Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0935
(323 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 30 0.075
SPAC328.08c |||tubulin specific chaperone cofactor C |Schizosacc... 29 0.23
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 27 0.53
SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type tran... 25 3.7
SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr ... 24 4.9
SPBP19A11.07c ||SPBP4H10.02c|human down-regulated in multiple ca... 24 6.5
SPAC24B11.14 ||SPAC806.10|sequence orphan|Schizosaccharomyces po... 24 6.5
SPAC10F6.11c |||kinase activator |Schizosaccharomyces pombe|chr ... 24 6.5
SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom... 24 6.5
SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr ... 23 8.6
SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|c... 23 8.6
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 30.3 bits (65), Expect = 0.075
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = -1
Query: 221 NSRPKLAKSVQPFSSFSETNEQQFIFIYIDFAS 123
N+ P+L +S++P+ S + + Q+FIF ++F S
Sbjct: 917 NAFPQLVRSLKPYISVLKQDHQEFIFAGLNFPS 949
>SPAC328.08c |||tubulin specific chaperone cofactor C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 259
Score = 28.7 bits (61), Expect = 0.23
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 109 MNVHVDAKSIYIKMNCCSLVSLKLENGWTDLANFGLELFVEVQRRFKRR---QI*KCSEL 279
+ V+ +A +Y + + L +LK +N ++ + V+V + R I CS +
Sbjct: 105 ITVNAEAPEVYFENDTLYLANLKNQNIGDNVIPYPNNKAVKVSAKSLRSCNISISNCSSV 164
Query: 280 NKNNNQFCFFVFP 318
N +N C F FP
Sbjct: 165 NLHNATKCNFTFP 177
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 27.5 bits (58), Expect = 0.53
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 117 SCGCKVYIYKNELLFVSLAKTRERLDRFG*FW 212
SCG Y K ELL + + TRE ++ G +W
Sbjct: 629 SCGYAYYETKRELLSIEIKVTRENYEK-GVYW 659
>SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type
transcription factor Ams2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 697
Score = 24.6 bits (51), Expect = 3.7
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = -1
Query: 317 GKTKKQNWLLFLFNSEHFHICLRLNLLWTSTNNSRPK 207
G K NW + + +C + WTS + RP+
Sbjct: 355 GTIKTANWRNATYMNITLMLCNACGIYWTSRRSMRPR 391
>SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 24.2 bits (50), Expect = 4.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 11 FFCYCLIIIIVLFQNCGYCFYFILVYYMKWY 103
F C CL++I L + G + IL ++ +Y
Sbjct: 36 FACQCLVLIRPLARKIGSFPFLILTFHTLFY 66
>SPBP19A11.07c ||SPBP4H10.02c|human down-regulated in multiple
cancers-1 homolog 2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 676
Score = 23.8 bits (49), Expect = 6.5
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 100 VLLMNVHVDAKSIYIKMNCCSLVSLKLENGWTDLANFGLELF 225
VL V +DAK IYI++ CS V+ G+ D N+ L F
Sbjct: 227 VLNSIVSLDAKDIYIRV-ICSFVN----TGFIDSTNWFLNSF 263
>SPAC24B11.14 ||SPAC806.10|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 166
Score = 23.8 bits (49), Expect = 6.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 290 LFLFNSEHFHICLRLNLLWTSTN 222
+F +N + H+CLRL L +N
Sbjct: 1 MFAYNHKTLHVCLRLISLRNCSN 23
>SPAC10F6.11c |||kinase activator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 481
Score = 23.8 bits (49), Expect = 6.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 319 KGKQKSKIGCYFYLIPSIFIFVYV*TSSGL 230
KG + +G Y Y SI I++Y SSG+
Sbjct: 28 KGPFEKFVGRYIYKYISILIYLYSFFSSGV 57
>SPBC354.13 |rga6||GTPase activating protein
Rga6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 733
Score = 23.8 bits (49), Expect = 6.5
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 224 NNSRPKLAKSVQPFSSFSETNEQ 156
NN++P +AKS ++ SETN++
Sbjct: 682 NNTKPIVAKSPVTVTASSETNKK 704
>SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 23.4 bits (48), Expect = 8.6
Identities = 7/30 (23%), Positives = 20/30 (66%)
Frame = +2
Query: 179 SRTAGPIWLILVLNYLWKSRGGLNVDKYEN 268
S + P++++L L+Y+W + +++++ N
Sbjct: 498 SMASSPLYIVL-LSYIWPDKETFDLNQFRN 526
>SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 958
Score = 23.4 bits (48), Expect = 8.6
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +3
Query: 129 KVYIYKNELLFVSLAKTRERLDRF 200
K + +NE+L+++L TR++ + F
Sbjct: 926 KAEVIENEMLYLTLKMTRDKFNVF 949
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,355,774
Number of Sequences: 5004
Number of extensions: 25273
Number of successful extensions: 79
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 87815546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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