Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0933
         (667 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66562-3|CAD44123.1|  485|Caenorhabditis elegans Hypothetical pr...    31   0.56 
Z66562-1|CAA91464.1|  519|Caenorhabditis elegans Hypothetical pr...    31   0.56 
Z81049-4|CAJ76935.1|  496|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z81049-3|CAB02846.2|  631|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>Z66562-3|CAD44123.1|  485|Caenorhabditis elegans Hypothetical
           protein F42E11.2c protein.
          Length = 485

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +1

Query: 202 CREPNNHVNISLSIKYMYFLHGYQVSSQSDARFSSYNGASVKTTVYLYNSIDSL 363
           C   N HVN  +SI     ++  +    S A+ S +  A++ TTV+L N  D++
Sbjct: 101 CLFANEHVNRGMSISINSIINTKKSYQISTAQISQFQEAALNTTVHLKNLEDTV 154


>Z66562-1|CAA91464.1|  519|Caenorhabditis elegans Hypothetical
           protein F42E11.2a protein.
          Length = 519

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +1

Query: 202 CREPNNHVNISLSIKYMYFLHGYQVSSQSDARFSSYNGASVKTTVYLYNSIDSL 363
           C   N HVN  +SI     ++  +    S A+ S +  A++ TTV+L N  D++
Sbjct: 101 CLFANEHVNRGMSISINSIINTKKSYQISTAQISQFQEAALNTTVHLKNLEDTV 154


>Z81049-4|CAJ76935.1|  496|Caenorhabditis elegans Hypothetical
           protein C48D1.1b protein.
          Length = 496

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 274 VSSQSDARFSSYNGASVKTTVYLYNSIDSLVF 369
           + S ++A  S YN   V  T Y + S+ +LV+
Sbjct: 147 IISVTEAETSQYNDVRVLNTAYFHKSVQALVY 178


>Z81049-3|CAB02846.2|  631|Caenorhabditis elegans Hypothetical
           protein C48D1.1a protein.
          Length = 631

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 274 VSSQSDARFSSYNGASVKTTVYLYNSIDSLVF 369
           + S ++A  S YN   V  T Y + S+ +LV+
Sbjct: 282 IISVTEAETSQYNDVRVLNTAYFHKSVQALVY 313


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,095,848
Number of Sequences: 27780
Number of extensions: 233127
Number of successful extensions: 364
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)