Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0932
         (816 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    22   5.1  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   6.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   6.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.9  

>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 475 VPTLSKNYPIKR 510
           +PT S  YPIKR
Sbjct: 55  IPTKSSKYPIKR 66


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 510 TRFTPNACVNRDK*VFVTFYDYSI 581
           T+F  N   N  + VF  FYD  I
Sbjct: 449 TKFEFNTVFNDQRTVFANFYDAMI 472


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = -2

Query: 218 ILKSFTETPKDGAIIKFRFIFLSKLKIGPYYYGNTLKVSKLLPRSYRAFVI 66
           +LK+   T  D   ++  + F +   I P+Y  N   +   L + Y  F+I
Sbjct: 394 VLKTTMSTFSDITFMRTVWKFFNIFLITPFYNFNENTIHSKLCKLYATFLI 444


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 69  YFSTNEYYSARQHLNANYMQL 7
           YFS N   + +QH  A+ +QL
Sbjct: 98  YFSFNSVRNVQQHTFADLIQL 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,580
Number of Sequences: 336
Number of extensions: 3093
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)