Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0931
         (693 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0227 - 18425790-18425890,18426046-18426114,18426296-18426533     28   6.1  
06_03_0222 - 18378892-18378992,18379106-18379174,18379356-18379593     28   6.1  

>06_03_0227 - 18425790-18425890,18426046-18426114,18426296-18426533
          Length = 135

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = -3

Query: 622 MNSVSSMINCFFVFEL--QAMKISYALI*SLTSKVFKNSYNICRTSFNRSFTCSHIS 458
           M  V S+I C  V  L  Q  KI         S   +N YN CR +     TC+ +S
Sbjct: 1   MEGVKSLIMCMLVLGLVLQQEKIQVEAKSCCPSTTARNVYNSCRFAGGSRDTCAKLS 57


>06_03_0222 - 18378892-18378992,18379106-18379174,18379356-18379593
          Length = 135

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = -3

Query: 622 MNSVSSMINCFFVFEL--QAMKISYALI*SLTSKVFKNSYNICRTSFNRSFTCSHIS 458
           M  V S+I C  V  L  Q  KI         S   +N YN CR +     TC+ +S
Sbjct: 1   MEGVKSLIMCMLVLGLVLQQEKIQVEAKSCCPSTTARNVYNSCRFAGGSRNTCAKLS 57


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,550,655
Number of Sequences: 37544
Number of extensions: 185109
Number of successful extensions: 392
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)