Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0931
         (693 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    23   2.8  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    23   3.6  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    23   3.6  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    22   4.8  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    22   4.8  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    22   4.8  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   4.8  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    22   4.8  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    22   4.8  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    22   4.8  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    21   8.4  

>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 205 KAISNHKRHRNNKITNYKIL 146
           K I N+  + NN   NYK L
Sbjct: 88  KTIHNNNNYNNNNYNNYKKL 107


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -3

Query: 265 CSNKLSLKTLMLVFMLGSICKAISNHKRHRNNKITNY 155
           C+N+      +L   L + C   +  ++H  NK+ NY
Sbjct: 53  CTNEGRELKKILPDALSTGCNKCNEKQKHTANKVVNY 89


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -3

Query: 265 CSNKLSLKTLMLVFMLGSICKAISNHKRHRNNKITNY 155
           C+N+      +L   L + C   +  ++H  NK+ NY
Sbjct: 53  CTNEGRELKKILPDALSTGCNKCNEKQKHTANKVVNY 89


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 196 SNHKRHRNNKITNYKIL 146
           SN+  + NN  TNYK L
Sbjct: 92  SNYNNYNNNYNTNYKKL 108


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 196 SNHKRHRNNKITNYKIL 146
           SN+  + NN  TNYK L
Sbjct: 92  SNYNNYNNNYNTNYKKL 108


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 196 SNHKRHRNNKITNYKIL 146
           SN+  + NN  TNYK L
Sbjct: 92  SNYNNYNNNYNTNYKKL 108


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 196 SNHKRHRNNKITNYKIL 146
           SN+  + NN  TNYK L
Sbjct: 92  SNYNNYNNNYNTNYKKL 108


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 196 SNHKRHRNNKITNYKIL 146
           SN+  + NN  TNYK L
Sbjct: 92  SNYNNYNNNYNTNYKKL 108


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 196 SNHKRHRNNKITNYKIL 146
           SN+  + NN  TNYK L
Sbjct: 92  SNYNNYNNNYNTNYKKL 108


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 196 SNHKRHRNNKITNYKIL 146
           SN+  + NN  TNYK L
Sbjct: 92  SNYNNYNNNYNTNYKKL 108


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 211 ICKAISNHKRHRNNKITNY 155
           I  ++SN   H NN   NY
Sbjct: 303 IISSLSNKTIHNNNNYNNY 321


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,139
Number of Sequences: 438
Number of extensions: 2672
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)