Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0929
(795 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 38 0.010
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 35 0.072
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 34 0.095
At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide famil... 33 0.17
At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide famil... 33 0.17
At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family... 33 0.22
At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /... 33 0.22
At3g49990.1 68416.m05466 expressed protein 32 0.38
At5g26200.1 68418.m03118 mitochondrial substrate carrier family ... 32 0.50
At5g63550.1 68418.m07976 expressed protein 31 1.2
At1g12080.2 68414.m01397 expressed protein 30 1.5
At1g34590.1 68414.m04299 hypothetical protein 30 2.0
At4g29060.1 68417.m04157 elongation factor Ts family protein sim... 29 2.7
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 29 2.7
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 29 2.7
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 29 2.7
At1g62480.1 68414.m07050 vacuolar calcium-binding protein-relate... 29 2.7
At4g11860.1 68417.m01887 expressed protein contains Pfam domain ... 29 4.7
At2g45800.1 68415.m05696 LIM domain-containing protein similar t... 29 4.7
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 29 4.7
At1g76710.2 68414.m08928 SET domain-containing protein (ASHH1) l... 28 6.2
At1g76710.1 68414.m08927 SET domain-containing protein (ASHH1) l... 28 6.2
At1g12080.1 68414.m01396 expressed protein 28 6.2
At1g03100.1 68414.m00285 pentatricopeptide (PPR) repeat-containi... 28 6.2
At2g02170.1 68415.m00153 remorin family protein contains Pfam do... 28 8.2
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 37.5 bits (83), Expect = 0.010
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Frame = +1
Query: 412 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA-------TDAEGSADSAAII 570
+ E + +K EE A E +K E++ + ++ EEK S T GSA + I
Sbjct: 260 ELETEVEVVKAEETAEATEQAKVELEGKLEDVIVEEKDSEINSKDEKTSESGSALCSEEI 319
Query: 571 PNMVKKIDLAPTVESDAAAIPEIKTPEAA--DAPKLADNPVDEDKPAD 708
+ +++ + P E++ A I E A + + D P +E+KP++
Sbjct: 320 LSTIQESNTDPIKETEGDASYPIDVIEKAITEEKHVVDEPANEEKPSE 367
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 34.7 bits (76), Expect = 0.072
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = +1
Query: 418 EAKSADIKVEE--PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKI 591
E + ++KVEE PA + + +A E EEKP AE + + A+
Sbjct: 145 EETTTEVKVEEEKPAVPAAEEEKSSEAAPVETKSEEKPE-EKAEVTTEKASSAEE----- 198
Query: 592 DLAPTVESDAAAIPEIKTPEAADAPKLADN-PVDEDKPAD 708
D TVE+ +I + PE+A AP + + V E +P +
Sbjct: 199 DGTKTVEAIEESIVSVSPPESAVAPVVVETVAVAEAEPVE 238
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 34.3 bits (75), Expect = 0.095
Identities = 23/99 (23%), Positives = 49/99 (49%)
Frame = +1
Query: 409 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 588
P A AK+ +K ++ ++ +DS +E + +K KP+A D+ S D + + +
Sbjct: 141 PAAAAKNGSVKAKKESSSEDDSSSEDEPAKKPAAKIAKPAAKDSSSSDDDS----DEDSE 196
Query: 589 IDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPA 705
+ T ++ AA + +++D +D +++KPA
Sbjct: 197 DEKPATKKAAPAAAKAASSSDSSDED--SDEESEDEKPA 233
>At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 33.5 bits (73), Expect = 0.17
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +1
Query: 403 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 582
E+ E ++K EEPA E +KTE T E KEE T +G A++
Sbjct: 133 EVKTKEIPVEEVKAEEPAKTEEPAKTE--GTSGE--KEEIVEET-KKGETPETAVVEEKK 187
Query: 583 KKIDLAPTVESDAAAIPE--IKTPEAADAPKLADNP 684
+++ + A A+ E +K PE +A+ P
Sbjct: 188 PEVEEKKEEATPAPAVVETPVKEPETTTTAPVAEPP 223
>At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 33.5 bits (73), Expect = 0.17
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +1
Query: 403 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 582
E+ E ++K EEPA E +KTE T E KEE T +G A++
Sbjct: 133 EVKTKEIPVEEVKAEEPAKTEEPAKTE--GTSGE--KEEIVEET-KKGETPETAVVEEKK 187
Query: 583 KKIDLAPTVESDAAAIPE--IKTPEAADAPKLADNP 684
+++ + A A+ E +K PE +A+ P
Sbjct: 188 PEVEEKKEEATPAPAVVETPVKEPETTTTAPVAEPP 223
>At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 370
Score = 33.1 bits (72), Expect = 0.22
Identities = 39/135 (28%), Positives = 53/135 (39%)
Frame = +1
Query: 280 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAA 459
E+P +PE K + AP+ +I K E+P K +I+ E
Sbjct: 237 ELPKLPEVPKLE-APKVPEIQKPELPKMPELPKMPEIQKP-ELP----KMPEIQKPELPK 290
Query: 460 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEI 639
PE K E+ TV E+ K E P + IP V K +L E A+PEI
Sbjct: 291 VPEVPKPELP-TVPEVPKSEAPKFPEIP--KPELPKIPE-VPKPELPKVPEITKPAVPEI 346
Query: 640 KTPEAADAPKLADNP 684
PE P+L P
Sbjct: 347 PKPELPTMPQLPKLP 361
Score = 28.7 bits (61), Expect = 4.7
Identities = 38/137 (27%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Frame = +1
Query: 280 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEA-KSADIKVEEPA 456
E+P PE K ++ P+ +I K EIP E K +I +
Sbjct: 110 ELPKFPEIPKPEL-PKMPEIPKPELPKVPEIQKPELP-KMPEIPKPELPKFPEIPKPDLP 167
Query: 457 AQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNM-VKKIDLAPTVESDAAAIP 633
PE+SK EV + E K E P + IP + K+ P +E A +P
Sbjct: 168 KFPENSKPEVPKLM-ETEKPEAPKVPE----------IPKPELPKLPEVPKLE--APKVP 214
Query: 634 EIKTPEAADAPKLADNP 684
EI+ PE P+L P
Sbjct: 215 EIQKPELPKMPELPKMP 231
>At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to SEC14-like protein 2
(Alpha-tocopherol associated protein) (TAP) (bTAP)
(Fragment) (SP:P58875) {Bos taurus}
Length = 683
Score = 33.1 bits (72), Expect = 0.22
Identities = 30/99 (30%), Positives = 44/99 (44%)
Frame = +1
Query: 409 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 588
P E K + K EE + E+ KTE ++ AE +EEK SA A I+
Sbjct: 123 PVKEEKVEEKKTEETEEKKEEVKTEEKSLEAETKEEEK-SAAPATVETKKEEILAAPAPI 181
Query: 589 IDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPA 705
+ E+ A P ++T A AP +A+ +E PA
Sbjct: 182 VAETKKEETPVAPAP-VETKPA--APVVAETKKEEILPA 217
>At3g49990.1 68416.m05466 expressed protein
Length = 502
Score = 32.3 bits (70), Expect = 0.38
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +1
Query: 406 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVK 585
+P A+ D+K E P A+P KT Q + E K+E+ +A AE A II K
Sbjct: 422 LPGRRAEQTDVKAEIPKAEPIKRKTHGQESKEE--KKERKNAVKAE--KREARIIKKQTK 477
Query: 586 KIDLAPTVESDAA 624
+ T + A
Sbjct: 478 MLYCGETQRAQRA 490
>At5g26200.1 68418.m03118 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 342
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -2
Query: 215 LTESSILGATSRIG*AGTTSFSSATGIAKLTAAKA 111
+T+SS+ AT R+G + TTS + A G A LT+A A
Sbjct: 112 ITKSSVGQATVRLGLSDTTSLAVANGAAGLTSAVA 146
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +1
Query: 403 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 582
E D + + +++VE+P+ + SK V+ + K+++PS A+GSA S +
Sbjct: 320 EKTDTDDEKDEVEVEKPSKKKSSSKKTVEESSGSKGKDKQPS---AKGSARSGEKSSKQI 376
Query: 583 KKIDLAP 603
K +P
Sbjct: 377 AKSTSSP 383
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/88 (25%), Positives = 43/88 (48%)
Frame = +1
Query: 397 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 576
+ E+ EA+ D + E+ + +D KTEV + +EEK AE ++ A++
Sbjct: 57 NEEVVVEEAEKKDEETEKKTEE-KDEKTEVITETPVVEEEEK----KAEEVTETPAVVEE 111
Query: 577 MVKKIDLAPTVESDAAAIPEIKTPEAAD 660
KK ++ +++ AA E+ +A +
Sbjct: 112 -EKKTEVVEEKQTEVAAAEEVAVEKAEE 138
>At1g34590.1 68414.m04299 hypothetical protein
Length = 820
Score = 29.9 bits (64), Expect = 2.0
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +1
Query: 406 IPDAEAKSADIKVEEPAAQPEDSKT-EVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 582
IPDA A D + P A PE S+ V A S DA ++ +IP+
Sbjct: 436 IPDAAAP-VDAGLISPRAAPEASRDGNVIPDAAAPVDAGLISLRDAPEASRDGNVIPDAA 494
Query: 583 KKIDLAPTVESDAAAIPEIKTPEAADAPKLAD 678
+D AP+ +A P + EA A ++D
Sbjct: 495 APVDAAPSEAQEAE--PSVAASEAVVALPVSD 524
>At4g29060.1 68417.m04157 elongation factor Ts family protein
similar to SP|P35019 Elongation factor Ts (EF-Ts)
{Galdieria sulphuraria}; contains Pfam profiles PF00627:
UBA/TS-N domain, PF00889: Elongation factor TS, PF00575:
S1 RNA binding domain
Length = 953
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +1
Query: 409 PDAEAKSADIKVEEPAAQP-EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVK 585
P+AEA +VEE P E + EV ++ EE+ AT AE D + +
Sbjct: 373 PEAEASVTSAEVEESVCVPAEVTSEEVPSSETPKVVEEEVIATKAE---DDSPEKEEQTE 429
Query: 586 KIDLAPTVESDAAAIPEIKTPE 651
+ A E IPE K+ E
Sbjct: 430 TLAAAAEAEEVVPPIPETKSEE 451
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 439 KVEEPAAQPEDSKTE-VQATVAEISKEEKPSATDAEG--SADSAAIIPNMVKKIDLAPTV 609
K E + P+ + + V E SK+ K + + +A A ++P+ I AP+V
Sbjct: 344 KPSESTSHPDSLNDKTISENVQESSKDAKVDSEACQNHPTASPATVVPDQDSTITAAPSV 403
Query: 610 ESDAAAIPEIKTP 648
+ +A KTP
Sbjct: 404 TQEDSAFNTEKTP 416
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 439 KVEEPAAQPEDSKTE-VQATVAEISKEEKPSATDAEG--SADSAAIIPNMVKKIDLAPTV 609
K E + P+ + + V E SK+ K + + +A A ++P+ I AP+V
Sbjct: 605 KPSESTSHPDSLNDKTISENVQESSKDAKVDSEACQNHPTASPATVVPDQDSTITAAPSV 664
Query: 610 ESDAAAIPEIKTP 648
+ +A KTP
Sbjct: 665 TQEDSAFNTEKTP 677
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Frame = +1
Query: 424 KSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPS-ATDAEGSADSAAIIPNMVKKIDLA 600
K K E+P +PE K E A ++ KP + + S+ P K +
Sbjct: 469 KQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQESSKQEPPKPEESPKPEPP 528
Query: 601 PTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPAD 708
ES P+ +TP+ ++PK + KP +
Sbjct: 529 KPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEE 564
>At1g62480.1 68414.m07050 vacuolar calcium-binding protein-related
contains weak similarity to vacuolar calcium binding
protein [Raphanus sativus] gi|9049359|dbj|BAA99394
Length = 152
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 280 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKV-EEPA 456
E P + E KKD+ AP ++ + K E+ + + + A + V EE
Sbjct: 73 ETPEVVEIKKDEEAPVETPVV---VEDESKTEEVVEAKKEEEVEEKKTEEAPVVVEEEKK 129
Query: 457 AQPEDSKTEVQATV-AEISKEEK 522
+ E+ K V+A+V A + K ++
Sbjct: 130 PEAEEEKPAVEASVTAPVEKADE 152
>At4g11860.1 68417.m01887 expressed protein contains Pfam domain
PF04424: Protein of unknown function (DUF544)
Length = 682
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +1
Query: 424 KSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 603
KS D+ ++ +++ +T SKE T +E + + + +
Sbjct: 336 KSEDLNHDQLSSKQSGGETACDVENVSSSKEAIVDVTSSEALSVDKGNLESAKSESSSES 395
Query: 604 TVESDAAAI-PEIK-TPEAADAPKLADNPVDEDKP 702
++SDAA+I P++ + DAP PV D+P
Sbjct: 396 VLKSDAASIDPDLSCRSQHDDAPNAFIPPVSTDEP 430
>At2g45800.1 68415.m05696 LIM domain-containing protein similar to
PGPS/D1 [Petunia x hybrida] GI:4105772, LIM domain
protein PLIM1 [Nicotiana tabacum] GI:5932418; contains
Pfam profile PF00412: LIM domain
Length = 226
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 277 DEVPAIPEAKKDDIAPE 327
D+ +IPEAK+DD APE
Sbjct: 197 DDTASIPEAKEDDAAPE 213
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = +1
Query: 391 AKSSEIPDAEAKSADIKVEEPAAQPED-------SKTEVQATVAEISKEEKPSATDAEGS 549
A E P AE ++ VEE AAQPE + E + A K++K + E
Sbjct: 308 AALGETPAAERPASSTPVEEKAAQPEPVAPVENAGEKEGEEETAAAKKKKKKKEKEKEKK 367
Query: 550 ADSAAIIPNMVK 585
A +AA + V+
Sbjct: 368 AAAAAAATSSVE 379
>At1g76710.2 68414.m08928 SET domain-containing protein (ASHH1) low
similarity to huntingtin interacting protein 1 [Homo
sapiens] GI:12697196; contains Pfam profile PF00856: SET
domain; identical to cDNA ASH1-like protein 1 (ASHH1)
partial cds GI:15488417
Length = 492
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +1
Query: 508 SKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPV 687
+ EEK E +S A+ N+ ++ D PT + +KT + D L+ N
Sbjct: 276 TNEEKEKDISTENHLESTAL--NIQQQSDSTPTPMEEDVVTETVKTETSEDMKLLSQNSQ 333
Query: 688 DEDKP 702
++ P
Sbjct: 334 EDSSP 338
>At1g76710.1 68414.m08927 SET domain-containing protein (ASHH1) low
similarity to huntingtin interacting protein 1 [Homo
sapiens] GI:12697196; contains Pfam profile PF00856: SET
domain; identical to cDNA ASH1-like protein 1 (ASHH1)
partial cds GI:15488417
Length = 492
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +1
Query: 508 SKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPV 687
+ EEK E +S A+ N+ ++ D PT + +KT + D L+ N
Sbjct: 276 TNEEKEKDISTENHLESTAL--NIQQQSDSTPTPMEEDVVTETVKTETSEDMKLLSQNSQ 333
Query: 688 DEDKP 702
++ P
Sbjct: 334 EDSSP 338
>At1g12080.1 68414.m01396 expressed protein
Length = 104
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/89 (24%), Positives = 42/89 (47%)
Frame = +1
Query: 394 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 573
K+ E E + D + E+ + +D KTEV + +EEK AE ++ A++
Sbjct: 22 KTVEETVVETEKKDEETEKKTEE-KDEKTEVITETPVVEEEEK----KAEEVTETPAVVE 76
Query: 574 NMVKKIDLAPTVESDAAAIPEIKTPEAAD 660
KK ++ +++ AA E+ +A +
Sbjct: 77 E-EKKTEVVEEKQTEVAAAEEVAVEKAEE 104
>At1g03100.1 68414.m00285 pentatricopeptide (PPR) repeat-containing
protein low similarity to CRP1 [Zea mays] GI:3289002;
contains Pfam profile PF01535: PPR repeat
Length = 793
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 413 MLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQKKKNL 526
M K+N+ + K+K ++L LK K YK + K Q + L
Sbjct: 740 MEKKNMFVDKYKYRMLFLKYHKTAYKGKAPKVQSESQL 777
>At2g02170.1 68415.m00153 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 486
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 412 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSA 561
+AE K ++KVE + +D + AT+ E EEK +A +A+ +A
Sbjct: 411 EAEMKKTEVKVERIKGRAQDRLMKKLATI-ERKAEEKRAAAEAKKDHQAA 459
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.129 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,247,016
Number of Sequences: 28952
Number of extensions: 194954
Number of successful extensions: 511
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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