Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0927
(472 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54439| Best HMM Match : SNF (HMM E-Value=0) 119 1e-27
SB_28888| Best HMM Match : SNF (HMM E-Value=1.9e-07) 116 1e-26
SB_32169| Best HMM Match : SNF (HMM E-Value=7.9e-16) 107 6e-24
SB_19951| Best HMM Match : SNF (HMM E-Value=0) 84 5e-17
SB_58853| Best HMM Match : SNF (HMM E-Value=0) 73 1e-13
SB_924| Best HMM Match : SNF (HMM E-Value=0.14) 71 6e-13
SB_16714| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_26602| Best HMM Match : SNF (HMM E-Value=0) 64 6e-11
SB_31334| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 7e-11
SB_22968| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 5e-08
SB_16713| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_6762| Best HMM Match : SNF (HMM E-Value=0) 52 2e-07
SB_26603| Best HMM Match : SNF (HMM E-Value=0) 42 3e-04
SB_26708| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_33793| Best HMM Match : 7tm_1 (HMM E-Value=9.99967e-42) 32 0.21
SB_16219| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_14879| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_1759| Best HMM Match : 7tm_1 (HMM E-Value=2.2e-36) 29 2.6
SB_46539| Best HMM Match : Keratin_B2 (HMM E-Value=1.2) 28 3.4
SB_30120| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_43292| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 28 4.5
SB_35214| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 28 4.5
SB_48580| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 28 4.5
SB_39978| Best HMM Match : 7tm_1 (HMM E-Value=8.54792e-44) 28 4.5
SB_5164| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 28 4.5
SB_3220| Best HMM Match : Ion_trans (HMM E-Value=5.6e-22) 27 7.8
>SB_54439| Best HMM Match : SNF (HMM E-Value=0)
Length = 701
Score = 119 bits (287), Expect = 1e-27
Identities = 51/125 (40%), Positives = 80/125 (64%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 IIHSGIYIFQLMDYYAAS-LSITYLAFFEVVAIAWFYGVGRLSRNIKQMTGRRPSIYFRF 178
+ G+Y+FQL D Y+AS + + +++ FE + I W YG R +N+ M G R + Y +
Sbjct: 289 VTEGGMYVFQLFDNYSASGICLLWISLFESIGIGWVYGAERFYQNMTDMIGFRINPYLKV 348
Query: 179 CWLIATPALLIALWVASLVDYTPPSYR-QYQYPAWAQAIGWIIASLSLLCIPVYAVIVVF 355
CW+ TP +A+++ SLV+Y P +Y Y+YP W AIGW++A S++CIP+ AVI +
Sbjct: 349 CWIFCTPIFCLAVFIFSLVNYEPLTYNLTYKYPVWGDAIGWLLALSSIVCIPLLAVINLM 408
Query: 356 RAPGE 370
RA G+
Sbjct: 409 RAEGD 413
>SB_28888| Best HMM Match : SNF (HMM E-Value=1.9e-07)
Length = 195
Score = 116 bits (279), Expect = 1e-26
Identities = 47/122 (38%), Positives = 74/122 (60%)
Frame = +2
Query: 2 IIHSGIYIFQLMDYYAASLSITYLAFFEVVAIAWFYGVGRLSRNIKQMTGRRPSIYFRFC 181
+ G++IF LMDY A LS+ +A E++ I W YGV R S +++ MTGRRP +FR C
Sbjct: 44 VFQGGMWIFNLMDYQVAGLSLLIVALLEIITIGWIYGVDRFSDDVEYMTGRRPMRWFRIC 103
Query: 182 WLIATPALLIALWVASLVDYTPPSYRQYQYPAWAQAIGWIIASLSLLCIPVYAVIVVFRA 361
W +P +A+ +A+L+ + Y YP WA+ IGW++ S+L IP +A+ +++
Sbjct: 104 WKYVSPLCTLAIILANLIQWKGVKYNGKPYPGWAELIGWMLMLSSVLMIPAFAIHEIYKR 163
Query: 362 PG 367
G
Sbjct: 164 SG 165
>SB_32169| Best HMM Match : SNF (HMM E-Value=7.9e-16)
Length = 258
Score = 107 bits (256), Expect = 6e-24
Identities = 45/125 (36%), Positives = 75/125 (60%)
Frame = +2
Query: 14 GIYIFQLMDYYAASLSITYLAFFEVVAIAWFYGVGRLSRNIKQMTGRRPSIYFRFCWLIA 193
G+++F L D ++ LS+ ++ FE++ I W YG R + NI QM GR ++ CW
Sbjct: 99 GMFVFNLFDSFSCGLSLLFVVCFELLVIGWIYGARRYADNISQMIGRPVLQWWVICWKYI 158
Query: 194 TPALLIALWVASLVDYTPPSYRQYQYPAWAQAIGWIIASLSLLCIPVYAVIVVFRAPGEN 373
+P +++ ++V SL Y +Y YPAWA+ +GW++A S+LCIPV +++A G
Sbjct: 159 SPIMVLGIFVFSLAKYKRITYENVPYPAWAEGVGWLLALSSMLCIPVTMCYKIYKAEG-T 217
Query: 374 LLEKL 388
L++L
Sbjct: 218 FLQRL 222
>SB_19951| Best HMM Match : SNF (HMM E-Value=0)
Length = 359
Score = 84.2 bits (199), Expect = 5e-17
Identities = 36/95 (37%), Positives = 58/95 (61%)
Frame = +2
Query: 83 EVVAIAWFYGVGRLSRNIKQMTGRRPSIYFRFCWLIATPALLIALWVASLVDYTPPSYRQ 262
+V+ +AW YG R + +I+ MTG + ++ W TPA++ +++ SLV + SY
Sbjct: 257 QVIVVAWGYGADRFALDIETMTGNKVWPWWPIAWKYITPAVITGIFIFSLVQWQGVSYDD 316
Query: 263 YQYPAWAQAIGWIIASLSLLCIPVYAVIVVFRAPG 367
YQYP WA+ +GW++A S+L IP A+ + RA G
Sbjct: 317 YQYPPWAEFVGWVMALSSMLWIPGVAIYKMSRAKG 351
>SB_58853| Best HMM Match : SNF (HMM E-Value=0)
Length = 905
Score = 72.9 bits (171), Expect = 1e-13
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Frame = +2
Query: 11 SGIYIFQLMDYYAASLSITYLAFFEVVAIAWFYGVGRLSRNIKQMTGRRPSIYFRFCWLI 190
SG Y Q+ D YA ++ + + FE+V +AW YG+ R +++ M RPS YF CW
Sbjct: 402 SGEYWLQMFDTYAGTIPLLIIGLFELVGVAWIYGIKRFEDDLEYMLKMRPSKYFTICWKY 461
Query: 191 ATPALLIALWVASLVD--YTPPSY----------RQYQYPAWAQAIGWIIASLSLLCIPV 334
+P L+I L ASL++ P Y + YP W A+ ++ S L IP
Sbjct: 462 VSPILVILLLGASLINMGLQPIKYSTWNFAKAVEEKLDYPPWGYAMIALLICSSFLFIPG 521
Query: 335 YAVIVVFR 358
++ FR
Sbjct: 522 IFLLRRFR 529
>SB_924| Best HMM Match : SNF (HMM E-Value=0.14)
Length = 429
Score = 70.5 bits (165), Expect = 6e-13
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = +2
Query: 14 GIYIFQLMDYYAASLSITYLAFFEVVAIAWFYGVGRLSRNIKQMTGRRPSIYFRFCWLIA 193
G+Y+F L DY A +S+ ++ F E + I W G RLSR I+ MTG+RPS +F CW
Sbjct: 46 GMYVFNLFDYQAGGISLLFVGFCEALVIGWGVGTERLSRMIETMTGKRPSFFFLLCWKFI 105
Query: 194 TP 199
+P
Sbjct: 106 SP 107
Score = 59.7 bits (138), Expect = 1e-09
Identities = 31/88 (35%), Positives = 51/88 (57%)
Frame = +2
Query: 170 FRFCWLIATPALLIALWVASLVDYTPPSYRQYQYPAWAQAIGWIIASLSLLCIPVYAVIV 349
F L+ +A+ VA L ++ SY + YP WA+AIGW++A S+L IP++A+I
Sbjct: 329 FTMVLLVLVTIFTMAIIVAQLALWSGISYNKKPYPDWAEAIGWLMALSSMLLIPLFAIIE 388
Query: 350 VFRAPGENLLEKLRYFHSPEFYLRLWRE 433
+A G +K+R SP+ + ++RE
Sbjct: 389 TCKAKGYTWRDKIRSALSPD--IEVFRE 414
>SB_16714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 961
Score = 65.7 bits (153), Expect = 2e-11
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Frame = +2
Query: 8 HSGIYIFQLMDYYAASLSITYLAFFEVVAIAWFYGVGRLSRNIKQMTGRRPSIYFRFCWL 187
HSG Y QL+D Y + + + +A E +AI++ YG+ R S +I+ MT + P +++CW
Sbjct: 714 HSGEYWVQLVDGYCSGIPLLIIALVECIAISYIYGIDRFSDDIQYMTNKPPRFIWKWCWK 773
Query: 188 IATPALLIALWVASLVDYTP--PSYRQYQ----------YPAWAQAIGWIIASLSLLCIP 331
+ +P ++A+ S+ + PSY + P W +G ++ S+ IP
Sbjct: 774 VISPLAILAVLGMSIKGMSEGRPSYSVWNDKLKKTVSKPLPPWGVFLGIMLTLCSIFFIP 833
Query: 332 VYAVIVVF 355
A + F
Sbjct: 834 AVAFLRYF 841
>SB_26602| Best HMM Match : SNF (HMM E-Value=0)
Length = 721
Score = 64.1 bits (149), Expect = 6e-11
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Frame = +2
Query: 8 HSGIYIFQLMDYYAASLSITYLAFFEVVAIAWFYGVGRLSRNIKQMTGRRPSIYFRFCWL 187
+SG Y Q+ D ++ +L + + E++ + W YG R +I+ M +RP+ YF+ W
Sbjct: 542 NSGEYWLQMFDSFSGTLPLLVIGMLEMIGVCWVYGSKRFEDDIEYMISKRPNWYFKITWR 601
Query: 188 IATPALLIALWVASLVDY--TPPSYRQY----------QYPAWAQAIGWIIASLSLLCIP 331
P ++ + VASLV P +Y + +YP W +I ++S+L IP
Sbjct: 602 YEAPVVVAGIVVASLVGMISKPITYSAWSNSESKVIDTEYPGWGLGCIAVIIAVSILPIP 661
Query: 332 VYAVI 346
+ ++
Sbjct: 662 LVFIL 666
>SB_31334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 63.7 bits (148), Expect = 7e-11
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +2
Query: 212 ALWVASLVDYTPPSYR-QYQYPAWAQAIGWIIASLSLLCIPVYAVIVVFRAPGENLLEKL 388
A+++ SLV+Y P +Y Y+YP W AIGW++A S++CIP+ AVI + RA G+ +++L
Sbjct: 1 AVFIFSLVNYEPLTYNLTYKYPVWGDAIGWLLALSSIVCIPLLAVINLMRAEGD-FIDRL 59
Query: 389 RYFHSP 406
R +P
Sbjct: 60 RSVTTP 65
>SB_22968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1332
Score = 54.4 bits (125), Expect = 5e-08
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +2
Query: 14 GIYIFQLMDYYAASLSITYLAFFEVVAIAWFYGVGRLSRNIKQMTGRRPSIYFRFCW 184
G+Y+F L D ++ +S+ +L FE++ I W YG R + +I + GR +++ CW
Sbjct: 1231 GMYVFNLFDSFSCGISLLFLVTFELIVIGWIYGARRYANDITRTIGRSVPLWWVLCW 1287
>SB_16713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 906
Score = 53.6 bits (123), Expect = 8e-08
Identities = 22/89 (24%), Positives = 48/89 (53%)
Frame = +2
Query: 14 GIYIFQLMDYYAASLSITYLAFFEVVAIAWFYGVGRLSRNIKQMTGRRPSIYFRFCWLIA 193
GIY+ +++D A+ + + F E + + + YG+ + S++I+ +TG P ++ CW
Sbjct: 710 GIYLLEIIDS-ASGFPLLVIGFCECIGLCYVYGLDKFSKDIELLTGSAPGWKWKLCWKFI 768
Query: 194 TPALLIALWVASLVDYTPPSYRQYQYPAW 280
+P +++ + V ++D + Y AW
Sbjct: 769 SPIIILGVIVGGMIDMI---QHERTYKAW 794
>SB_6762| Best HMM Match : SNF (HMM E-Value=0)
Length = 507
Score = 52.0 bits (119), Expect = 2e-07
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +2
Query: 2 IIHSGIYIFQLMDYYAASLSITYLAFFEVVAIAWFYGVGRLSRNIKQM 145
+ G Y+ L DY + +S+ +L FFE V +AW YG R S++I+ M
Sbjct: 429 VTQGGAYVLNLFDYQSGGVSLLFLGFFETVCLAWIYGADRFSKDIEDM 476
>SB_26603| Best HMM Match : SNF (HMM E-Value=0)
Length = 518
Score = 41.9 bits (94), Expect = 3e-04
Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 31/147 (21%)
Frame = +2
Query: 11 SGIYIFQLMDYYAASLSITYLAFFEVVAIAWFYGVG-------------------RLSRN 133
SG Y Q+ D ++ L + ++ FE++ +A+ YG+ R +
Sbjct: 341 SGEYWLQMFDSFSGPLPLLFVGLFELIGVAYVYGLRRFESDIEYMIRLFSCFYHCRFESD 400
Query: 134 IKQMTGRRPSIYFRFCWLIATPALLIALWVASLV------------DYTPPSYRQYQYPA 277
I+ M G RP Y+ W + +P +++A+ V S+V D+ + YP
Sbjct: 401 IEYMIGCRPGWYWLISWFVLSPLVVLAIIVPSVVSLAVKPVGYTVWDFAKADTKILAYPW 460
Query: 278 WAQAIGWIIASLSLLCIPVYAVIVVFR 358
W + + S L IP V+ R
Sbjct: 461 WGHIVIAFLIGSSCLFIPGVFVVRALR 487
>SB_26708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 39.5 bits (88), Expect = 0.001
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 14 GIYIFQLMDYYAASLSITYLAFFEVVAIAWFYG 112
G YIFQ+ D Y+ ++ + +A F+ + +AW YG
Sbjct: 6 GYYIFQMFDDYSVTIPLLVIALFQCIGVAWVYG 38
>SB_33793| Best HMM Match : 7tm_1 (HMM E-Value=9.99967e-42)
Length = 315
Score = 32.3 bits (70), Expect = 0.21
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +2
Query: 44 YAASLSITYLAFFEVVAIAWFYGVGRLSRNIKQMTGRRPSIYFRFCWLIA 193
YA++ S+T ++AI +Y V + + K T RR ++ FCWL+A
Sbjct: 98 YASAFSLT------IIAIERYYAVVKPTHAKKAFTMRRLKLFVLFCWLLA 141
>SB_16219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 30.7 bits (66), Expect = 0.64
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Frame = +2
Query: 155 RPSIYFRFCWLIATPALLIALWVASLVD---YTPPSYRQYQYPAWA-----QAIGWII-A 307
RP +Y R + T +++ +WV + V+ Y YR + +PA A + W++
Sbjct: 128 RPHLYRRIFTSVNTKVMIVCVWVLTCVEPIPYLSLGYRYFFHPAKAFCFPDSRLHWVVLT 187
Query: 308 SLSLLCIPVYAVIVVF 355
+++ IP+ +++ +
Sbjct: 188 GYAIVSIPMPILVICY 203
>SB_14879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 308 SLSLLCIPVYAVIVVFRAPGENLLEKLRYFHSPEFYLRLWREW 436
SL +P+ + ++ G+N L H FY LWREW
Sbjct: 111 SLKKNAVPLTELYPIYDESGDNDDSALAIEHVRFFYGNLWREW 153
>SB_1759| Best HMM Match : 7tm_1 (HMM E-Value=2.2e-36)
Length = 401
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/66 (25%), Positives = 24/66 (36%)
Frame = +2
Query: 20 YIFQLMDYYAASLSITYLAFFEVVAIAWFYGVGRLSRNIKQMTGRRPSIYFRFCWLIATP 199
Y F + Y S IT F +AI WFY + R + + CW P
Sbjct: 125 YRFFTIAYPFWSKKITKTHVFYCIAIIWFYSCMTALLPVMGWRDRPSQVINKMCWFQYKP 184
Query: 200 ALLIAL 217
++ L
Sbjct: 185 EFIVFL 190
>SB_46539| Best HMM Match : Keratin_B2 (HMM E-Value=1.2)
Length = 300
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 16 HIHIPINGLLCRFAQYHVSCIFRSCCH 96
H I ++ LLCR+ +Y V I CC+
Sbjct: 6 HAVIYVDMLLCRYCRYAVMSILSICCY 32
>SB_30120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 281 AQAIGWIIASLSLLCIPVYAVIVVFRAPGENLLEKLRYF 397
A IG+I +L +L PV+A V+F P ++ ++ R F
Sbjct: 9 AHTIGYITGALIVLWAPVFAAEVLFYFPELSISDETREF 47
>SB_43292| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 645
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 252 ATGSTNIQHGHKQLVGLSPPFPYYAFLCTL**SYLEHPGKI 374
+T T I G+KQ++ +PP P+Y S L P KI
Sbjct: 314 STEITRILSGYKQILPSTPPSPFYKSYALTNSSPLSSPRKI 354
>SB_35214| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 762
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 252 ATGSTNIQHGHKQLVGLSPPFPYYAFLCTL**SYLEHPGKI 374
+T T I G+KQ++ +PP P+Y S L P KI
Sbjct: 166 STEITRILSGYKQILPSTPPSPFYKSYALTNSSPLSSPRKI 206
>SB_48580| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 847
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 252 ATGSTNIQHGHKQLVGLSPPFPYYAFLCTL**SYLEHPGKI 374
+T T I G+KQ++ +PP P+Y S L P KI
Sbjct: 314 STEITRILSGYKQILPSTPPSPFYKSYALTNSSPLSSPRKI 354
>SB_39978| Best HMM Match : 7tm_1 (HMM E-Value=8.54792e-44)
Length = 429
Score = 27.9 bits (59), Expect = 4.5
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = +2
Query: 155 RPSIYFRFCWLIATPALLIALWVASLVDYTPPSY-RQYQYPAWAQAIGWIIASLSLLCIP 331
RP +Y R C A+ L +WV +L P + + + A I +
Sbjct: 190 RPEMYRRLCTRKASLIKLSVVWVFALASVAIPQFSKNISFRFQANRAACFITLVDFTVNM 249
Query: 332 VYAV--IVVFRAP 364
VY V +VVF AP
Sbjct: 250 VYTVFSLVVFIAP 262
>SB_5164| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 435
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 252 ATGSTNIQHGHKQLVGLSPPFPYYAFLCTL**SYLEHPGKI 374
+T T I G+KQ++ +PP P+Y S L P KI
Sbjct: 314 STEITRILSGYKQILPSTPPSPFYKSYALTNSSPLSSPRKI 354
>SB_3220| Best HMM Match : Ion_trans (HMM E-Value=5.6e-22)
Length = 256
Score = 27.1 bits (57), Expect = 7.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 393 ISIRPSSICDCGVNGCD 443
+S +P I CGVNGCD
Sbjct: 229 LSPKPRGILVCGVNGCD 245
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,809,146
Number of Sequences: 59808
Number of extensions: 371827
Number of successful extensions: 874
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 982083920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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