Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0924
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   6.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.4  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 337  YLLINYMLFYVICYTISINLQAI 405
            Y +I  + F ++C+T   N+Q I
Sbjct: 949  YNIIPILFFMLVCFTCKSNIQLI 971


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 337  YLLINYMLFYVICYTISINLQAI 405
            Y +I  + F ++C+T   N+Q I
Sbjct: 949  YNIIPILFFMLVCFTCKSNIQLI 971


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 337  YLLINYMLFYVICYTISINLQAI 405
            Y +I  + F ++C+T   N+Q I
Sbjct: 949  YNIIPILFFMLVCFTCKSNIQLI 971


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 337  YLLINYMLFYVICYTISINLQAI 405
            Y +I  + F ++C+T   N+Q I
Sbjct: 949  YNIIPILFFMLVCFTCKSNIQLI 971


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 337 NHYSNHRSGANVTLKNH 287
           +H  NH   AN +LK+H
Sbjct: 334 HHVVNHHVAANGSLKHH 350


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 666 TSLAYFSYYTDM 631
           T L++F+YY DM
Sbjct: 241 TMLSHFAYYVDM 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,758
Number of Sequences: 336
Number of extensions: 2958
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)