Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0923
         (739 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DBEF8D Cluster: UPI0000DBEF8D related cluster; n...    34   4.2  
UniRef50_A5ZCV7 Cluster: Putative uncharacterized protein; n=1; ...    33   5.5  
UniRef50_A0BN48 Cluster: Chromosome undetermined scaffold_118, w...    33   9.7  

>UniRef50_UPI0000DBEF8D Cluster: UPI0000DBEF8D related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DBEF8D UniRef100 entry -
           Rattus norvegicus
          Length = 230

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
 Frame = +1

Query: 1   HTHTHTSAFIFIGYVQFEFAFSWNVLCVC-YSLFMCYS*FILMMLY-LIQVISSRYYLGL 174
           HTHTHT    +I Y+ F +A +   +CVC ++    ++ +I M +Y LI++    +   L
Sbjct: 32  HTHTHTHTHTYI-YIYFMYACAQVCVCVCVHARTHRHTLYICMYIYMLIRMHMCGFLCTL 90

Query: 175 SLQEQNLFLSLN 210
           S   Q ++  ++
Sbjct: 91  SNNTQYIYTGMH 102


>UniRef50_A5ZCV7 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides caccae ATCC 43185|Rep: Putative
           uncharacterized protein - Bacteroides caccae ATCC 43185
          Length = 421

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = +3

Query: 24  FYIYRLRSIRIRF*LERIVCLLFIIYVLQLIYT---DDVVFDSGNFF 155
           FY+YRL  I +R+   R++C+L     L +++    +  ++  GN F
Sbjct: 357 FYLYRLMFINVRYIKNRVICILLGFLFLSIVFAEGKEPYIYHYGNTF 403


>UniRef50_A0BN48 Cluster: Chromosome undetermined scaffold_118, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_118, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 1137

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 24   FYIYRLRSIRIRF*LERIVCLLFIIYVLQLIYTDDVV 134
            F +Y L  + I F L+ I C LF+ Y+ Q ++ D+VV
Sbjct: 1087 FDMYLLVGVLIEFILDSIFCDLFLTYLYQSLFIDEVV 1123


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,717,850
Number of Sequences: 1657284
Number of extensions: 9702866
Number of successful extensions: 20674
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20570
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)