Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0923
         (739 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    24   1.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.6  

>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = -2

Query: 702 CVKKYIIIIIQHFYRVEICDIKALVHNVFIY 610
           CV  ++I  ++HF+ + + +  A+  N + Y
Sbjct: 37  CVSPFVIGYVKHFHPLALSNKNAIDFNYYYY 67


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/49 (20%), Positives = 27/49 (55%)
 Frame = +1

Query: 22   AFIFIGYVQFEFAFSWNVLCVCYSLFMCYS*FILMMLYLIQVISSRYYL 168
            AF+    +    +F +N++ + + + +C++    + L + Q++S+ Y L
Sbjct: 934  AFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYAL 982


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/49 (20%), Positives = 27/49 (55%)
 Frame = +1

Query: 22   AFIFIGYVQFEFAFSWNVLCVCYSLFMCYS*FILMMLYLIQVISSRYYL 168
            AF+    +    +F +N++ + + + +C++    + L + Q++S+ Y L
Sbjct: 934  AFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYAL 982


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/49 (20%), Positives = 27/49 (55%)
 Frame = +1

Query: 22   AFIFIGYVQFEFAFSWNVLCVCYSLFMCYS*FILMMLYLIQVISSRYYL 168
            AF+    +    +F +N++ + + + +C++    + L + Q++S+ Y L
Sbjct: 934  AFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYAL 982


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/49 (20%), Positives = 27/49 (55%)
 Frame = +1

Query: 22   AFIFIGYVQFEFAFSWNVLCVCYSLFMCYS*FILMMLYLIQVISSRYYL 168
            AF+    +    +F +N++ + + + +C++    + L + Q++S+ Y L
Sbjct: 934  AFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYAL 982


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 67   WNVLCVCYSLFMC 105
            WNVL  C  LF+C
Sbjct: 1125 WNVLLNCVYLFLC 1137


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 690 YIIIIIQHFYRVEI-CDIKALVHNVFIYFKLLIS 592
           ++I +  H +R  I C I  LV NV I F  LIS
Sbjct: 515 FMIGLNSHGFRFYIACGIMILVANVAISFGYLIS 548


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,514
Number of Sequences: 336
Number of extensions: 2977
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)