Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0923
         (739 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens ...    31   3.3  
AF073299-1|AAD41635.1|  812|Homo sapiens Na+/H+ exchanger isofor...    30   7.5  
AC007239-1|AAF19248.1|  812|Homo sapiens unknown protein.              30   7.5  

>AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26336 fis, clone HRT02842. ).
          Length = 236

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +1

Query: 1   HTHTHTSAFIFIGYVQFEFAFSWNVLCVCYSLFMCYS*FILMMLYL 138
           +TH HT  +I I    + + +S+  +C+   +F+C   +I +  Y+
Sbjct: 74  YTHMHTYMYIHIHAYAYIYVYSYTRICIHICVFICTHAYIYVYSYV 119


>AF073299-1|AAD41635.1|  812|Homo sapiens Na+/H+ exchanger isoform 2
           protein.
          Length = 812

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = +1

Query: 10  THTSAFIFIGYVQFEFAFSWNVLCVCYSLFMCYS*FILMMLYLIQVISSRYYLGLSLQEQ 189
           + T  FIF+G         WN   VC++L  C     L +  L QVI+    + L+ ++Q
Sbjct: 370 SETLIFIFMGVSTVGKNHEWNWAFVCFTLAFCLMWRALGVFVLTQVINRFRTIPLTFKDQ 429


>AC007239-1|AAF19248.1|  812|Homo sapiens unknown protein.
          Length = 812

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = +1

Query: 10  THTSAFIFIGYVQFEFAFSWNVLCVCYSLFMCYS*FILMMLYLIQVISSRYYLGLSLQEQ 189
           + T  FIF+G         WN   VC++L  C     L +  L QVI+    + L+ ++Q
Sbjct: 370 SETLIFIFMGVSTVGKNHEWNWAFVCFTLAFCLMWRALGVFVLTQVINRFRTIPLTFKDQ 429


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,813,626
Number of Sequences: 237096
Number of extensions: 1338906
Number of successful extensions: 2051
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2050
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)