Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0923
         (739 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69663-4|CAA93508.1|  287|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AC199169-9|ABO33255.1|  435|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z69663-4|CAA93508.1|  287|Caenorhabditis elegans Hypothetical
           protein K02B9.3a protein.
          Length = 287

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 75  IVCLLFIIYVLQLIYTDDVVFDSGNFF 155
           I+C LF   +LQ++ TD ++F    +F
Sbjct: 177 IICTLFFNLILQILITDSLIFSETPWF 203


>AC199169-9|ABO33255.1|  435|Caenorhabditis elegans Hypothetical
           protein F38A1.4 protein.
          Length = 435

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 78  VCLLFIIYVLQLIYTDDVVFDS 143
           +CLLFI+ V  L YTD V FD+
Sbjct: 17  MCLLFILLVF-LFYTDKVCFDN 37


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,861,035
Number of Sequences: 27780
Number of extensions: 241877
Number of successful extensions: 532
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)