Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0922
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39678-10|AAV28360.1|  436|Caenorhabditis elegans Hypothetical p...    31   1.1  
AL021175-1|CAA15965.1|  307|Caenorhabditis elegans Hypothetical ...    28   8.0  

>U39678-10|AAV28360.1|  436|Caenorhabditis elegans Hypothetical
           protein C39D10.11 protein.
          Length = 436

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -1

Query: 731 KSIIPTVNSDEYL*LGRAVCSISTTRETCAYFVSVISSPK 612
           K ++P  NS E    G   C IS    TC Y    I +PK
Sbjct: 261 KCVVPIQNSCEPFLWGNNACIISRDNPTCFYLAHTILNPK 300


>AL021175-1|CAA15965.1|  307|Caenorhabditis elegans Hypothetical
           protein Y6E2A.1 protein.
          Length = 307

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -1

Query: 98  GVKL*LLCLNFKQYYVNITDNNKKSRFSI 12
           G+ L LL +NF   Y+++T  +K SRFS+
Sbjct: 58  GMMLSLLTINFYYRYLSVTCPSKLSRFSL 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,365,913
Number of Sequences: 27780
Number of extensions: 302278
Number of successful extensions: 558
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)